Miyakogusa Predicted Gene

Lj6g3v2218350.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2218350.1 Non Chatacterized Hit- tr|I1K2P5|I1K2P5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42347
PE,34.77,0.00000000000004,PUF,Pumilio RNA-binding repeat; PUM,Pumilio
RNA-binding repeat; PUM_HD,Pumilio RNA-binding repeat; A,CUFF.60847.1
         (2307 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72664 similar to UniRef100_A7QII7 Cluster: Chromosome...   353   3e-96
gnl|LJGI|DC593109                                                     276   6e-73

>gnl|LJGI|TC72664 similar to UniRef100_A7QII7 Cluster: Chromosome chr12 scaffold_103,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_103, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (9%)
          Length = 568

 Score =  353 bits (178), Expect = 3e-96
 Identities = 178/178 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2130 cttcgcacagttgcttcaagatcctcatgcaaattatgttgttcaatcagcactaaaaca 2189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    cttcgcacagttgcttcaagatcctcatgcaaattatgttgttcaatcagcactaaaaca 60

                                                                        
Query: 2190 ttccgagggcgatgtgcataattcactggttgaagcaatcgagtcccacaaagcaatttc 2249
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ttccgagggcgatgtgcataattcactggttgaagcaatcgagtcccacaaagcaatttc 120

                                                                      
Query: 2250 acgaaatagtccctattccaaaaagatattctcgcagaagcttttgaagaaatgatgt 2307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  acgaaatagtccctattccaaaaagatattctcgcagaagcttttgaagaaatgatgt 178


>gnl|LJGI|DC593109 
          Length = 568

 Score =  276 bits (139), Expect = 6e-73
 Identities = 139/139 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatggaaaacgtgaaggatgaaggtgaccttgaaatgttgttgggtgagatccctcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 atgatggaaaacgtgaaggatgaaggtgaccttgaaatgttgttgggtgagatccctcac 489

                                                                       
Query: 61  aatctccttcatctttacgatcaccgccagtttctgcccaaacagccggtgaatggcggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aatctccttcatctttacgatcaccgccagtttctgcccaaacagccggtgaatggcggt 549

                              
Query: 121 ggtgtgttttatgatgatg 139
           |||||||||||||||||||
Sbjct: 550 ggtgtgttttatgatgatg 568