Miyakogusa Predicted Gene
- Lj6g3v2218220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2218220.1 tr|G7INW0|G7INW0_MEDTR Calmodulin-binding
transcription activator OS=Medicago truncatula
GN=MTR_2g00,79.62,0,CG-1,CG-1 DNA-binding domain; Ank_2,Ankyrin
repeat-containing domain; IQ,IQ motif, EF-hand binding s,CUFF.60842.1
(3126 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP055570 weakly similar to UniRef100_Q6NPP4 Cluster: Ca... 1082 0.0
gnl|LJGI|TC59910 similar to UniRef100_Q0WQF9 Cluster: Calmodulin... 880 0.0
gnl|LJGI|TC74004 similar to UniRef100_Q9SWV4 Cluster: ER66 prote... 196 6e-49
gnl|LJGI|TC69984 similar to UniRef100_Q9FY74 Cluster: Calmodulin... 190 4e-47
gnl|LJGI|GO037107 similar to UniRef100_A7R6U8 Cluster: Chromosom... 72 2e-11
gnl|LJGI|DC592988 similar to UniRef100_A7R6U8 Cluster: Chromosom... 66 1e-09
gnl|LJGI|TC69028 similar to UniRef100_A7NVX6 Cluster: Chromosome... 66 1e-09
gnl|LJGI|TC68275 similar to UniRef100_A7R3S4 Cluster: Chromosome... 54 5e-06
>gnl|LJGI|BP055570 weakly similar to UniRef100_Q6NPP4 Cluster: Calmodulin-binding
transcription activator 2; n=2; Arabidopsis thaliana|Rep:
Calmodulin-binding transcription activator 2 -
Arabidopsis thaliana (Mouse-ear cress), partial (9%)
Length = 581
Score = 1082 bits (546), Expect = 0.0
Identities = 569/573 (99%), Gaps = 3/573 (0%)
Strand = Plus / Minus
Query: 1362 gtttagcataaatgatttttcacctaaatgggcttatgctgagtcagaaattgaggtgtt 1421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gtttagcataaatgatttttcacctaaatgggcttatgctgagtcagaaattgaggtgtt 522
Query: 1422 gatcattggatcatttttgatgagtcaaccagaagtgaggaccagtaactggtcatgtat 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gatcattggatcatttttgatgagtcaaccagaagtgaggaccagtaactggtcatgtat 462
Query: 1482 gtttggggaagttgaggttcatgctgaggttttatctaacggaattctgtgctgtcaagc 1541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gtttggggaagttgaggttcatgctgaggttttatctaacggaattctgtgctgtcaagc 402
Query: 1542 tcctcatcataaggttggacgggtccctttctatgtaacatgctccaataggttagcttg 1601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tcctcatcataaggttggacgggtccctttctatgtaacatgctccaataggttagcttg 342
Query: 1602 tagtgaagtacgggagtttgactacagagagggcttttctagaaaagttggcattgaaga 1661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tagtgaagtacgggagtttgactacagagagggcttttctagaaaagttggcattgaaga 282
Query: 1662 ttttttcaatagttcaactgatatgctgcttcatttgcgactggaggaattgctttctct 1721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ttttttcaatagttcaactgatatgctgcttcatttgcgactggaggaattgctttctct 222
Query: 1722 catgccagtgcaccctccaaatcaaacctttgagggtgatgtggagaaaagaaacttaat 1781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 catgccagtgcaccctccaaatcaaacctttgagggtgatgtggagaaaagaaacttaat 162
Query: 1782 ttttaaccttatttcactaagagaggaagaggaattttcaactaaggaagagctaactgt 1841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 ttttaaccttatttcactaagagaggaagaggaattttcaactaaggaagagctaactgt 102
Query: 1842 agagatggatatatcacaacagaaggagcatctgttttgcagacaggttaaagagaagct 1901
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 agagatggatatatcac-acagaaggagcatctgttttgcagacaggttaaagagaagct 43
Query: 1902 ctactcatggcttc-ttcacaaagtaactgagg 1933
|||||| ||||||| |||||| |||||||||||
Sbjct: 42 ctactc-tggcttcattcacanagtaactgagg 11
>gnl|LJGI|TC59910 similar to UniRef100_Q0WQF9 Cluster: Calmodulin-binding transcription
activator 1; n=1; Arabidopsis thaliana|Rep:
Calmodulin-binding transcription activator 1 -
Arabidopsis thaliana (Mouse-ear cress), partial (10%)
Length = 804
Score = 880 bits (444), Expect = 0.0
Identities = 444/444 (100%)
Strand = Plus / Plus
Query: 2683 caggcccatgtaagaggtcaccaggtaaggaagcagtataaaacagtcatttggtctgtg 2742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 caggcccatgtaagaggtcaccaggtaaggaagcagtataaaacagtcatttggtctgtg 61
Query: 2743 ggaatcctggaaaaggtcatattacgctggagacgcaagggtagtggtttacgaggattc 2802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggaatcctggaaaaggtcatattacgctggagacgcaagggtagtggtttacgaggattc 121
Query: 2803 cgaccagatgccgttaataaagttccctgcctacaacaaaatgattctcagaaggaggat 2862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cgaccagatgccgttaataaagttccctgcctacaacaaaatgattctcagaaggaggat 181
Query: 2863 gaatatgattatcttaaggaaggacggaagcaaagtgaggaaaagatccaaaaggccctt 2922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gaatatgattatcttaaggaaggacggaagcaaagtgaggaaaagatccaaaaggccctt 241
Query: 2923 tctagggtgaagtccatggttcagtatccagaggcacgagctcaataccggcgcttgcta 2982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tctagggtgaagtccatggttcagtatccagaggcacgagctcaataccggcgcttgcta 301
Query: 2983 aatgttgttgatgacttccgtcaaaagaaggcgagcaatatggatttgatccattctgaa 3042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aatgttgttgatgacttccgtcaaaagaaggcgagcaatatggatttgatccattctgaa 361
Query: 3043 gagacagttgatggtatggaggatttgattgatattgatatgcttttagatgatgataat 3102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gagacagttgatggtatggaggatttgattgatattgatatgcttttagatgatgataat 421
Query: 3103 ttcattcctatagcatttgattga 3126
||||||||||||||||||||||||
Sbjct: 422 ttcattcctatagcatttgattga 445
>gnl|LJGI|TC74004 similar to UniRef100_Q9SWV4 Cluster: ER66 protein; n=1; Solanum
lycopersicum|Rep: ER66 protein - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum), partial (27%)
Length = 1169
Score = 196 bits (99), Expect = 6e-49
Identities = 575/730 (78%), Gaps = 29/730 (3%)
Strand = Plus / Plus
Query: 2422 cgtaatgctacccaagctgcagatcgtatacatcaagtattcagaatgcagtcatttcag 2481
||||||||||| |||||||| ||||||||||| || |||||||||||||| ||||| |||
Sbjct: 21 cgtaatgctacacaagctgcggatcgtatacaccaggtattcagaatgcaatcattccag 80
Query: 2482 aggaagcagttaactcag---actgaaga------------tggtgagtttgatttgtta 2526
||||| |||||| ||||| | |||||| || |||| ||| ||||
Sbjct: 81 aggaaacagttagctcagtatattgaagagtatgaagatgatgatgagcttggattgtct 140
Query: 2527 gatcagcaagctctttcccttctagcatctaaggcaagcaaatctggactaggagatggt 2586
|| ||||||||| ||||||||||||| || | || |||||| ||||| |||| | ||
Sbjct: 141 gagcagcaagctatttcccttctagcttccgaaacatgcaaatatggacaaggaaagggg 200
Query: 2587 ttagccaatgctgctgcagtacaaatacagaaaaaatttcgtggttggaagaagagaaaa 2646
|| |||||||||||||| ||||||||||||| || ||||||||||||| ||||||| |
Sbjct: 201 ttggccaatgctgctgcgctacaaatacagaagaagtttcgtggttggaccaagagaaga 260
Query: 2647 gaattcttgatcattcgtcaaagaattgttaaaattcaggcccatgtaagaggtcaccag 2706
||||||||| ||||||||||||| || || ||||| |||||||||||||||||||||||
Sbjct: 261 gaattcttgttcattcgtcaaaggatagtcaaaatccaggcccatgtaagaggtcaccaa 320
Query: 2707 gtaaggaagcagtataaaacag---tcatttggtctgtgggaatcctggaaaaggtcata 2763
| ||| ||| || | ||| ||| || ||||||| ||||||||| |||| ||||| ||
Sbjct: 321 gcaagaaagaagcacaaaccagacctcctttggtccgtgggaatcttggagaaggtggta 380
Query: 2764 ttacgctggagacgcaagggtagtggtttacgaggattccgaccagatgccgttaataaa 2823
|| || ||||| || ||||| |||||| || ||||| || ||||||||| ||| |
Sbjct: 381 ttgcggtggaggcgtaagggccatggtttgcgtggatttcgcccagatgcccccaat-ga 439
Query: 2824 gttccctgcctacaacaaaatgattc----tcagaaggaggatgaatatgattatcttaa 2879
| ||| | ||||| | | ||| |||||| |||||||| ||||||| ||| ||
Sbjct: 440 gctccagg--aacaaccaggtccttcgaattcagaa-gaggatgattatgattttctcaa 496
Query: 2880 ggaaggacggaagcaaagtgaggaaaagatccaaaaggccctttctagggtgaagtccat 2939
||||||| |||| || ||||| | || |||||||||||||||| || |||||||| ||
Sbjct: 497 ggaaggaaggaaacagagtgaagcaagattccaaaaggccctttcaagagtgaagtctat 556
Query: 2940 ggttcagtatccagaggcacgagctcaataccggcgcttgctaaatgttgttgatgactt 2999
|||||||||||||||||| || |||||||||||||| || ||||| | || || |||||
Sbjct: 557 ggttcagtatccagaggctcgggctcaataccggcgtgtgttaaatatagtagaggactt 616
Query: 3000 ccgtcaaa---agaaggcgagcaatatggatttgatccattctgaagagacagttgatgg 3056
|||| || || ||| ||| | | | || |||| |||||| ||||||||||
Sbjct: 617 tcgtcgaacccagcaggaatctaatcagaactcaataaattcggaagaggcagttgatgg 676
Query: 3057 tatggaggatttgattgatattgatatgcttttagatgatgataatttcattcctatagc 3116
| |||| ||||||||||||||||| |||||| ||||||||||||||||||| ||| ||||
Sbjct: 677 tttggaagatttgattgatattgacatgcttctagatgatgataatttcatacctttagc 736
Query: 3117 atttgattga 3126
||| ||||||
Sbjct: 737 attcgattga 746
>gnl|LJGI|TC69984 similar to UniRef100_Q9FY74 Cluster: Calmodulin-binding
transcription activator 1; n=1; Arabidopsis
thaliana|Rep: Calmodulin-binding transcription activator
1 - Arabidopsis thaliana (Mouse-ear cress), partial
(15%)
Length = 1074
Score = 190 bits (96), Expect = 4e-47
Identities = 138/152 (90%)
Strand = Plus / Plus
Query: 271 gtgggaagtgttgatgtgttacactgctactatgctcatggagaagaaaatgaaaacttt 330
|||||||||||||||| | | ||||| |||||||| ||||||||||||| |||||| |||
Sbjct: 305 gtgggaagtgttgatgcgctgcactgttactatgcccatggagaagaaagtgaaaatttt 364
Query: 331 caaaggcgaagctattggatgcttgaacaggatatgatgcacatagtatttgtgcactac 390
|| |||||||||||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 365 cagaggcgaagctattggatgcttgaacaggatatgatgcatatagtattcgtccactac 424
Query: 391 ttggaagttaagggtaacaagtcaaatattgg 422
||||| ||||||| ||||||| ||||||||||
Sbjct: 425 ttggatgttaaggttaacaagacaaatattgg 456
Score = 143 bits (72), Expect = 8e-33
Identities = 135/156 (86%)
Strand = Plus / Plus
Query: 54 tgaagcccagaatcggtggctgcgacctgcggaaatttgtgaaattcttcgtaactatcg 113
||||||||| |||| ||| |||| ||||| ||||| ||||||||||||||||| |||||
Sbjct: 88 tgaagcccaacatcgctggttgcgccctgcagaaatatgtgaaattcttcgtaattatcg 147
Query: 114 gatgtttgatatcacatcagaacctcataacaagccaccaagtggttcactttttctttt 173
| ||||| | |||||||| ||||| | ||| | |||||||||||||||||||||||| ||
Sbjct: 148 gttgtttcaaatcacatccgaaccgcctaataggccaccaagtggttcactttttctctt 207
Query: 174 tgatcgcaaagttttgagatacttcagaaaggatgg 209
|||||| || |||||||| ||||| |||||||||||
Sbjct: 208 tgatcggaaggttttgaggtactttagaaaggatgg 243
Score = 54.0 bits (27), Expect = 5e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 872 tccaatctaattggcagattccttttgaaggcaat 906
||||||| |||||||||||||||||||||| ||||
Sbjct: 996 tccaatcgaattggcagattccttttgaagacaat 1030
>gnl|LJGI|GO037107 similar to UniRef100_A7R6U8 Cluster: Chromosome undetermined
scaffold_1431, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1431,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (12%)
Length = 649
Score = 71.9 bits (36), Expect = 2e-11
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 1567 cctttctatgtaacatgctccaataggttagcttgtagtgaagtacgggagtttga 1622
|||||||||||||| || |||||||||||||| |||||||||||||| || |||||
Sbjct: 207 cctttctatgtaacttgttccaataggttagcatgtagtgaagtacgagaatttga 262
>gnl|LJGI|DC592988 similar to UniRef100_A7R6U8 Cluster: Chromosome undetermined
scaffold_1431, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1431,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (4%)
Length = 497
Score = 65.9 bits (33), Expect = 1e-09
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 274 ggaagtgttgatgtgttacactgctactatgctcatggagaagaaaatgaaaactttcaa 333
|||||||| ||||| | |||||||||||||| |||||||||| | ||||||| ||||||
Sbjct: 127 ggaagtgtggatgtactgcactgctactatgcccatggagaaggacatgaaaattttcaa 186
Query: 334 aggcgaagctattggatgcttgaacagga 362
|| || | || |||||||||||| ||||
Sbjct: 187 agacgcacttactggatgcttgaagagga 215
>gnl|LJGI|TC69028 similar to UniRef100_A7NVX6 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 881
Score = 65.9 bits (33), Expect = 1e-09
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 147 gccaccaagtggttcactttttctttttgatcgcaaagttttgagatacttcagaaagga 206
||||||||||||||||||||| || |||||||| || || || ||||||| ||||||||
Sbjct: 342 gccaccaagtggttcacttttcctatttgatcggaaggtgatgcgatactttagaaagga 401
Query: 207 tgggcataa 215
||| |||||
Sbjct: 402 tggtcataa 410
Score = 65.9 bits (33), Expect = 1e-09
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 274 ggaagtgttgatgtgttacactgctactatgctcatggagaagaaaatgaaaactttcaa 333
|||||||| ||||| | |||||||||||||| |||||||||| | ||||||| ||||||
Sbjct: 469 ggaagtgtggatgtactgcactgctactatgcccatggagaaggacatgaaaattttcaa 528
Query: 334 aggcgaagctattggatgcttgaacagga 362
|| || | || |||||||||||| ||||
Sbjct: 529 agacgcacttactggatgcttgaagagga 557
>gnl|LJGI|TC68275 similar to UniRef100_A7R3S4 Cluster: Chromosome undetermined
scaffold_561, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_561, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(20%)
Length = 559
Score = 54.0 bits (27), Expect = 5e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 2677 aaaattcaggcccatgtaagaggtcaccaggtaaggaag 2715
||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 3 aaaattcaggctcatgtgagaggtcaccaggttaggaag 41