Miyakogusa Predicted Gene

Lj6g3v2218190.2
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2218190.2 Non Chatacterized Hit- tr|I1KUC8|I1KUC8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44591
PE,81.56,0,AMIDASE,NULL; AMIDASE,Amidase; Amidase,Amidase;
TPR_11,NULL; TPR_1,Tetratricopeptide TPR-1; TPR,Tetr,CUFF.60830.2
         (1827 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78149 similar to UniRef100_A7QIF4 Cluster: Chromosome...   313   2e-84
gnl|LJGI|TC71499 similar to UniRef100_A7PSC3 Cluster: Chromosome...    68   2e-10
gnl|LJGI|TC81574 similar to UniRef100_Q53VM3 Cluster: Ser/Thr pr...    56   8e-07

>gnl|LJGI|TC78149 similar to UniRef100_A7QIF4 Cluster: Chromosome chr12 scaffold_103,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_103, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (34%)
          Length = 789

 Score =  313 bits (158), Expect = 2e-84
 Identities = 442/537 (82%), Gaps = 6/537 (1%)
 Strand = Plus / Plus

                                                                       
Query: 141 agacttcggtgcttttgttcagcgttttgagcttctccccttccctcaccctcaccctcc 200
           |||||| ||||||||  || |||||||||||||||| ||||||||||| ||||  |||||
Sbjct: 250 agactttggtgctttcattgagcgttttgagcttcttcccttccctcagcctcctcctcc 309

                                                                       
Query: 201 gccactcaaccaaacccaaatgctctctactctaaccttcgccgtcaaagacatatttga 260
             ||  ||| ||||      |||||||| |||||||||| ||| | |  |||||||||||
Sbjct: 310 tgcagccaagcaaa------tgctctctgctctaacctttgccatgagtgacatatttga 363

                                                                       
Query: 261 tgtgaagggctatgtgactggttttgggaaccctgactgggagaggacgcacgaggaggc 320
           |||||||||||||||||| || ||||| || ||||| ||| |||||||||| ||||   |
Sbjct: 364 tgtgaagggctatgtgacggggtttggaaatcctgagtggaagaggacgcatgaggcatc 423

                                                                       
Query: 321 tggcgatactgccattgtcatcactgctctgctcaggaatggtgctacttgtgttggcaa 380
            |   | |||||  ||||  | |||||| |||||| |||||| || ||||||||||||||
Sbjct: 424 ggagaagactgcgcttgtgttgactgctttgctcaagaatggggccacttgtgttggcaa 483

                                                                       
Query: 381 gactgttatggatcaattctcttttgggatttctggtgagaacaagcattatgggacacc 440
           ||||||| ||||| ||||||||| |||||||| ||||||||||||  |||| || || ||
Sbjct: 484 gactgttttggatgaattctcttatgggatttttggtgagaacaaatattacggaactcc 543

                                                                       
Query: 441 aaccaatcctctgttgccgtcttgcattcctggaggttcttccagtggttcagctgtagc 500
           ||| ||||| | | |||| || || || || ||||| || || ||||||||||| |||||
Sbjct: 544 aacgaatccccaggtgccttcgtgtatcccgggagggtcatctagtggttcagcagtagc 603

                                                                       
Query: 501 agttgctgctggcctagttgactttgctattggtactgatactacaggttgtgtaagaat 560
           ||||||||| || || |||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 604 agttgctgcaggacttgttgactttgctattggtactgatactacaggatgtgtgagaat 663

                                                                       
Query: 561 tccagcagcattctgtggtattcttggatttcgaccatctcatggaattgtatccaccat 620
           ||||||| |||||||||||||| | || ||||||||||| ||||||  ||| ||  ||||
Sbjct: 664 tccagcatcattctgtggtattttcggttttcgaccatcccatggagctgtgtcagccat 723

                                                                    
Query: 621 tggagttcttccaaacgctcaaagcttggacactgttggatggtttgctcgagatcc 677
           ||||||||| || || || |||||||| |||||  ||||||||||||| || |||||
Sbjct: 724 tggagttctccccaatgcacaaagcttagacaccattggatggtttgcccgtgatcc 780


>gnl|LJGI|TC71499 similar to UniRef100_A7PSC3 Cluster: Chromosome chr14 scaffold_27,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_27, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (44%)
          Length = 735

 Score = 67.9 bits (34), Expect = 2e-10
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                     
Query: 244 gtcaaagacatatttgatgtgaagggctatgtgactggttttgggaaccctgactggg 301
           ||||||||||||||||||||||| || |||||  ||||||||||||| ||||| ||||
Sbjct: 251 gtcaaagacatatttgatgtgaaagggtatgtagctggttttgggaatcctgattggg 308


>gnl|LJGI|TC81574 similar to UniRef100_Q53VM3 Cluster: Ser/Thr protein kinase; n=1;
            Lotus japonicus|Rep: Ser/Thr protein kinase - Lotus
            japonicus, partial (6%)
          Length = 995

 Score = 56.0 bits (28), Expect = 8e-07
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                
Query: 1460 gtaatttggaatcttctgaacttttaaaagagaagg 1495
            |||||||||||||||||| ||||||| |||||||||
Sbjct: 515  gtaatttggaatcttctggacttttagaagagaagg 550