Miyakogusa Predicted Gene

Lj6g3v2218130.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2218130.1 Non Chatacterized Hit- tr|I3S2J2|I3S2J2_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,56.92,0.00000000006,seg,NULL; no description,NULL;
Peptidase_C14,Peptidase C14, caspase catalytic,CUFF.60825.1
         (574 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78705 weakly similar to UniRef100_Q0DRF7 Cluster: Os0...   264   5e-70

>gnl|LJGI|TC78705 weakly similar to UniRef100_Q0DRF7 Cluster: Os03g0388900 protein;
           n=3; Oryza sativa|Rep: Os03g0388900 protein - Oryza
           sativa subsp. japonica (Rice), partial (36%)
          Length = 1446

 Score =  264 bits (133), Expect = 5e-70
 Identities = 163/173 (94%)
 Strand = Plus / Plus

                                                                       
Query: 261 tccactgaagcctccttctgcatatggtcacaagagggctgtgttattcggaatccatta 320
           |||||||| |||||||||||||||||||||||| || |||||||||||||||||| ||||
Sbjct: 257 tccactgaggcctccttctgcatatggtcacaaaagagctgtgttattcggaatcaatta 316

                                                                       
Query: 321 tggtaacacggcagcgccgaggcttaaaggttctgtgaataatgctcagtgcatgaaaga 380
            ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 cggtaacacggcggcaccgaggcttaaaggttctgtgaataatgctcagtgcatgaaaga 376

                                                                
Query: 381 ctttttgattaacaagttgagtttccctagtaattccatttggatgttcacag 433
           ||||||||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct: 377 ctttttgattaacaagttgggtttccctggtgattccatttggatgttcacag 429



 Score =  218 bits (110), Expect = 3e-56
 Identities = 185/210 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagaaacactaggatgaatatcatccctcagcccaatcaggatggtgatggtgatgct 60
           ||||||||||||||| |||| |||||| |||||||||| ||||| | ||||| |||||||
Sbjct: 30  atgagaaacactaggttgaacatcatctctcagcccaaccaggaagctgatgctgatgct 89

                                                                       
Query: 61  atttctaacataaaacatgtggaattgaagtctattatgtcttccatagagaacattaaa 120
           |||||||||| ||||| | |||| ||| ||| | ||| |||||||||| ||||||| |||
Sbjct: 90  atttctaacacaaaacctttggagttgcagtttcttacgtcttccatacagaacatcaaa 149

                                                                       
Query: 121 gctttgatcaacaatcctgggagcgtttcagggaatgggaatgggtcattttatcttaac 180
           |||||||| ||||||||||||| ||||||||| ||||||||||| |||||||||||| | 
Sbjct: 150 gctttgataaacaatcctgggaacgtttcaggaaatgggaatggatcattttatcttcat 209

                                         
Query: 181 atccaaaacgtaaacgtgcatcatcctggg 210
           ||||||||||| ||||||||||| ||||||
Sbjct: 210 atccaaaacgtcaacgtgcatcaccctggg 239