Miyakogusa Predicted Gene
- Lj6g3v2217030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2217030.1 tr|B9H725|B9H725_POPTR Methyl binding domain
protein OS=Populus trichocarpa GN=MBD909 PE=4
SV=1,40.37,2e-17,seg,NULL; ZINC_FINGER_C2H2_1,Zinc finger, C2H2;
ZINC_FINGER_C2H2_2,Zinc finger, C2H2,CUFF.60833.1
(940 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64825 1324 0.0
gnl|LJGI|TC59334 weakly similar to UniRef100_A7NUY0 Cluster: Chr... 359 2e-98
>gnl|LJGI|TC64825
Length = 862
Score = 1324 bits (668), Expect = 0.0
Identities = 668/668 (100%)
Strand = Plus / Plus
Query: 273 ggtgccttcaaggatctctaagatggatgcgctcattgaaattgctcaaaactctattat 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggtgccttcaaggatctctaagatggatgcgctcattgaaattgctcaaaactctattat 61
Query: 333 ggaggattctgtcatggaaccccataattcagctaaaatgaatgtgatacccgattctga 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggaggattctgtcatggaaccccataattcagctaaaatgaatgtgatacccgattctga 121
Query: 393 aattgctgttggtgactttgaccaagacatggactttgaatatcctaccgatgtggtgga 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aattgctgttggtgactttgaccaagacatggactttgaatatcctaccgatgtggtgga 181
Query: 453 tgatttaaatctgcaatgtagcacgcatttactcatgaatggaaaaggagatgaaattga 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgatttaaatctgcaatgtagcacgcatttactcatgaatggaaaaggagatgaaattga 241
Query: 513 tgattataaccaagttattgatgcagagggggttactcttctagatagcatggatttgtc 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgattataaccaagttattgatgcagagggggttactcttctagatagcatggatttgtc 301
Query: 573 atatgtaaacgagcaaaatgtccatgtatctggtacttcaaagggaaaagaagatgttgc 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atatgtaaacgagcaaaatgtccatgtatctggtacttcaaagggaaaagaagatgttgc 361
Query: 633 gttgacagctgcggggtttggccagtctgggattgatttggaagtggtttctcaaagccc 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gttgacagctgcggggtttggccagtctgggattgatttggaagtggtttctcaaagccc 421
Query: 693 tttatttcctttatctggttgcactaacagtaaagggcaattcaaacttgatgaagacaa 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tttatttcctttatctggttgcactaacagtaaagggcaattcaaacttgatgaagacaa 481
Query: 753 tagcaagaacagtgagttgaaatttagtttagatggctgcaaggatgtacctgttagggc 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tagcaagaacagtgagttgaaatttagtttagatggctgcaaggatgtacctgttagggc 541
Query: 813 tgattttcaagagatagtcatgtcagtttctgaagaagttgtggtccattctagcatttc 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgattttcaagagatagtcatgtcagtttctgaagaagttgtggtccattctagcatttc 601
Query: 873 taaccgctctatatccacagaacaacctctggattgttttccagccttcagctctgataa 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 taaccgctctatatccacagaacaacctctggattgttttccagccttcagctctgataa 661
Query: 933 gatataag 940
||||||||
Sbjct: 662 gatataag 669
>gnl|LJGI|TC59334 weakly similar to UniRef100_A7NUY0 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 1311
Score = 359 bits (181), Expect = 2e-98
Identities = 181/181 (100%)
Strand = Plus / Plus
Query: 1 atgacctttggtgagaaagattcatacttgcagcatctgttgtccgttcaccagaggacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 atgacctttggtgagaaagattcatacttgcagcatctgttgtccgttcaccagaggacg 1190
Query: 61 accaggcggtaccgacttggttctactgttggagatggagttataattaaagatggaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 accaggcggtaccgacttggttctactgttggagatggagttataattaaagatggaaag 1250
Query: 121 tttgagtgccaattctgccataaggtgtttctagaaaggcgtcgctacaatggtcatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 tttgagtgccaattctgccataaggtgtttctagaaaggcgtcgctacaatggtcatgtc 1310
Query: 181 g 181
|
Sbjct: 1311 g 1311