Miyakogusa Predicted Gene

Lj6g3v2206920.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2206920.1 tr|D1AHK4|D1AHK4_SEBTE Outer membrane
autotransporter barrel domain protein (Precursor)
OS=Sebaldell,27.87,0.57,seg,NULL,
NODE_63626_length_498_cov_11.453815.path1.1
         (468 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS321664 similar to UniRef100_Q69ZA4 Cluster: MKIAA1783...   753   0.0  

>gnl|LJGI|FS321664 similar to UniRef100_Q69ZA4 Cluster: MKIAA1783 protein; n=1; Mus
           musculus|Rep: MKIAA1783 protein - Mus musculus (Mouse),
           partial (3%)
          Length = 629

 Score =  753 bits (380), Expect = 0.0
 Identities = 407/420 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctgccttttttattcgaaaagcgatcgatgtttggaaattggaaggaacgcttttct 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 87  atgctgccttttttattcgaaaagcggtcgatgtttggaaattggaaggaacgcttttct 146

                                                                       
Query: 61  caagcggatctctcagagcttcaagaagagatgtacattttgaagcaaggagtcactgcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 caagcggatctctcagagcttcaagaagagatgtacattttgaagcaaggagtcactgcg 206

                                                                       
Query: 121 atgaagatcgttgatgaattggaggtcctctacccacctttacccaccgggcaaccactt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atgaagatcgttgatgaattggaggtcctctacccacctttacccaccgggcaaccactt 266

                                                                       
Query: 181 aaccttgacacaccacagcaatcccctgaggtattaccggtttctcatcctatcacacga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaccttgacacaccacagcaatcccctgaggtattaccggtttctcatcctatcacacga 326

                                                                       
Query: 241 tactcaactcgctcttgtcgtgtcccttctccctctggtatatatacccgccctatacct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tactcaactcgctcttgtcgtgtcccttctccctctggtatatatacccgccctatacct 386

                                                                       
Query: 301 tgcccaacaagcataacaatccatttcaaccagccatttctgctgcaatgnnnnnnnnnn 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||          
Sbjct: 387 tgcccaacaagcataacaatccatttcaaccagccatttctgctgcaatgtctctctctc 446

                                                                       
Query: 361 nncaggttcttcttcaggttttggttctgctggtggaaaatcatcattgtttcctacagg 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tccaggttcttcttcaggttttggttctgctggtggaaaatcatcattgtttcctacagg 506