Miyakogusa Predicted Gene

Lj6g3v2203710.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2203710.1 Non Chatacterized Hit- tr|I3S0H2|I3S0H2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,45.04,0.000000004,seg,NULL,CUFF.60794.1
         (333 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70006 weakly similar to UniRef100_Q8LCN5 Cluster: Cla...   660   0.0  

>gnl|LJGI|TC70006 weakly similar to UniRef100_Q8LCN5 Cluster: Classical
           arabinogalactan protein 1 precursor; n=1; Arabidopsis
           thaliana|Rep: Classical arabinogalactan protein 1
           precursor - Arabidopsis thaliana (Mouse-ear cress),
           partial (37%)
          Length = 566

 Score =  660 bits (333), Expect = 0.0
 Identities = 333/333 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctcgcttcttcttgcctttgatgctagtcgctgctttgttcttgagctccacaatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38  atggctcgcttcttcttgcctttgatgctagtcgctgctttgttcttgagctccacaatg 97

                                                                       
Query: 61  gctcaatctccagcctcatcgccgaccaagtcggagtccgccgctccaccgaggaaggcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  gctcaatctccagcctcatcgccgaccaagtcggagtccgccgctccaccgaggaaggcg 157

                                                                       
Query: 121 ttgtctccgacggcgacacccgtttcaccggcggtttctccttcttctactgaagagtca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ttgtctccgacggcgacacccgtttcaccggcggtttctccttcttctactgaagagtca 217

                                                                       
Query: 181 ccagctgctgttcccgccgccatcactccctcctccatctctggtccaccatctgaagct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ccagctgctgttcccgccgccatcactccctcctccatctctggtccaccatctgaagct 277

                                                                       
Query: 241 ccagggccggctgccaacggtgccgttttgaacagagtcgccgtctctggatctgctgcg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ccagggccggctgccaacggtgccgttttgaacagagtcgccgtctctggatctgctgcg 337

                                            
Query: 301 atcgtgattttcgctgctgctttgctcatgtag 333
           |||||||||||||||||||||||||||||||||
Sbjct: 338 atcgtgattttcgctgctgctttgctcatgtag 370