Miyakogusa Predicted Gene
- Lj6g3v2193690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2193690.1 Non Chatacterized Hit- tr|I3S139|I3S139_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.01,0,Ring
finger,Zinc finger, RING-type; RING/U-box,NULL; ZF_RING_2,Zinc finger,
RING-type; SUBFAMILY NOT,CUFF.60885.1
(1218 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60131 similar to UniRef100_A7Q662 Cluster: Chromosome... 2307 0.0
gnl|LJGI|AV773722 230 2e-59
gnl|LJGI|TC67929 similar to UniRef100_Q9SRQ8 Cluster: RING-H2 fi... 62 9e-09
gnl|LJGI|TC78801 similar to UniRef100_A7PC80 Cluster: Chromosome... 56 5e-07
>gnl|LJGI|TC60131 similar to UniRef100_A7Q662 Cluster: Chromosome undetermined
scaffold_55, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_55, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(25%)
Length = 1546
Score = 2307 bits (1164), Expect = 0.0
Identities = 1200/1218 (98%)
Strand = Plus / Plus
Query: 1 atggttcttcatcacaggaagctgatgatgcaagaagcctgtgaattcatctgtcatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atggttcttcatcacaggaagctgatgatgcaagaagcctgtgaattcatctgtcatgga 129
Query: 61 aaggattcaggatcatcatgttcatcagactgcagagtttgcctcaaaatctgcctaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 aaggattcaggatcatcatgttcatcagactgcagagtttgcctcaaaatctgcctaacc 189
Query: 121 aatcctcctcaatttccttatttcttcccttctcctccaccatcaccaccacaatcttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aatcctcctcaatttccttatttcttcccttctcctccaccatcaccaccacaatcttct 249
Query: 181 ttctacatagatgttgatgatnnnnnnnnnnnnnnnnnnagagtttcctcctccacctac 240
||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 250 ttctacatagatgttgatgatcaccaccaccaccaccacagagtttcctcctccacctac 309
Query: 241 ctgatcctcactcttgctcttctcggtgctgctttctttgttgtttgctgcagtgcaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctgatcctcactcttgctcttctcggtgctgctttctttgttgtttgctgcagtgcaatc 369
Query: 301 tacaccaggctctgttccagaaacaggggaataatttcacagagggaggaaacagaggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tacaccaggctctgttccagaaacaggggaataatttcacagagggaggaaacagaggag 429
Query: 361 gtgcatgatgattttcttgatgaagaacatggtgcaattgtggaccaccccatttggtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gtgcatgatgattttcttgatgaagaacatggtgcaattgtggaccaccccatttggtac 489
Query: 421 atccgaactactggtcttcaccaatcgattatcaaggcaatcacggtttgcaggtataag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 atccgaactactggtcttcaccaatcgattatcaaggcaatcacggtttgcaggtataag 549
Query: 481 aaaggtgaggggttgattgaaggaacagagtgctctgtttgcttgagtgagtttcaagag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aaaggtgaggggttgattgaaggaacagagtgctctgtttgcttgagtgagtttcaagag 609
Query: 541 agtgagagtttgagacttttgcctaagtgtcaccatgcttttcatttaccttgtattgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 agtgagagtttgagacttttgcctaagtgtcaccatgcttttcatttaccttgtattgat 669
Query: 601 acatggcttaattctcataccaattgccccatgtgtcgtgctcccattgttactgaccct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 acatggcttaattctcataccaattgccccatgtgtcgtgctcccattgttactgaccct 729
Query: 661 gctgctagagttccatctatggagtctgttgttgctgttgatttggaacatgcccagatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gctgctagagttccatctatggagtctgttgttgctgttgatttggaacatgcccagatg 789
Query: 721 gaaattttggaaaatagtggtgaatctggtgaaggaatggaaaatgatgcttctgataat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gaaattttggaaaatagtggtgaatctggtgaaggaatggaaaatgatgcttctgataat 849
Query: 781 aattctgaattgaggaatagggtagatgaagaaggccaattggaagttgaagatggggct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 aattctgaattgaggaatagggtagatgaagaaggccaattggaagttgaagatggggct 909
Query: 841 aggatttgtgaagctgaaggcacagatgcaggggtggtgagtattcaccctaagagatca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 aggatttgtgaagctgaaggcacagatgcaggggtggtgagtattcaccctaagagatca 969
Query: 901 gtttctcttgattctttttctgttgcaaatatcaatcttgctgctattggaacttttcta 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 gtttctcttgattctttttctgttgcaaatatcaatcttgctgctattggaacttttcta 1029
Query: 961 tcaagggaatctaatggtgctaactcacatagagtgctggagggtgttgttgaatttgaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1030 tcaagggaatctaatggtgctaactcacatagagtgctggagggtgttgttgaatttgaa 1089
Query: 1021 cctggtgtttcaaagagggttagtgggaatgagaatctggctattatatcaaaaggtagc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1090 cctggtgtttcaaagagggttagtgggaatgagaatctggctattatatcaaaaggtagc 1149
Query: 1081 tcttctttcaggtcaatgagatatctgagaggtgttcctagctcaatgaagaggtcacgt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1150 tcttctttcaggtcaatgagatatctgagaggtgttcctagctcaatgaagaggtcacgt 1209
Query: 1141 tcctacaatgggaaataccttctgtcctggtatagccgcagtcagaagaagcaaaatgct 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1210 tcctacaatgggaaataccttctgtcctggtatagccgcagtcagaagaagcaaaatgct 1269
Query: 1201 aatctgagaagcttttaa 1218
||||||||||||||||||
Sbjct: 1270 aatctgagaagcttttaa 1287
>gnl|LJGI|AV773722
Length = 392
Score = 230 bits (116), Expect = 2e-59
Identities = 156/168 (92%), Gaps = 1/168 (0%)
Strand = Plus / Minus
Query: 1052 agaatctggctattatatcaaaaggtagctcttctttcaggtcaatgagatatctgagag 1111
||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 392 agaatctggctattatatccaaaggtagctcttctgtcaggtccatgagatatctgagag 333
Query: 1112 gtgttcctagctcaatgaagaggtcacgttcctacaatgggaaataccttctgtcctggt 1171
||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 332 gtggtcctagctccatgaagaggtcacgttcctaccatgggaaataccttctgtcctggt 273
Query: 1172 atagccgcagtcagaagaagcaaaatgc-taatctgagaagcttttaa 1218
|||||| | ||| |||||||| |||||| || ||||||||||||||||
Sbjct: 272 atagcccccgtccgaagaagccaaatgcttattctgagaagcttttaa 225
>gnl|LJGI|TC67929 similar to UniRef100_Q9SRQ8 Cluster: RING-H2 finger protein ATL3A;
n=2; Arabidopsis thaliana|Rep: RING-H2 finger protein
ATL3A - Arabidopsis thaliana (Mouse-ear cress), partial
(37%)
Length = 668
Score = 61.9 bits (31), Expect = 9e-09
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 514 tctgtttgcttgagtgagtttcaagagagtgagagtttgagacttttgcctaagtgtcac 573
|||||||| |||| |||||||| |||| ||||||||||||| | ||||| || || ||
Sbjct: 562 tctgtttgtttgaccgagtttcaggagaatgagagtttgagattgttgccgaaatgcaac 621
Query: 574 catgcttttcatttaccttgtattgat 600
|| ||||||||| | ||||||||||||
Sbjct: 622 cacgcttttcatcttccttgtattgat 648
>gnl|LJGI|TC78801 similar to UniRef100_A7PC80 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (66%)
Length = 1145
Score = 56.0 bits (28), Expect = 5e-07
Identities = 106/132 (80%)
Strand = Plus / Plus
Query: 511 tgctctgtttgcttgagtgagtttcaagagagtgagagtttgagacttttgcctaagtgt 570
||||| ||||| || || ||||||||||| |||||||| | || |||||||| |||||
Sbjct: 441 tgctccgtttgtttaagcgagtttcaagacggtgagagtattaggcttttgccaaagtgc 500
Query: 571 caccatgcttttcatttaccttgtattgatacatggcttaattctcataccaattgcccc 630
||||||||||||| | ||| ||||| |||||||| || ||||| ||||||||||
Sbjct: 501 agccatgcttttcatctcaattgcattgacacatggctcaaatctcactccaattgccct 560
Query: 631 atgtgtcgtgct 642
| |||||||||
Sbjct: 561 ctttgtcgtgct 572