Miyakogusa Predicted Gene

Lj6g3v2193650.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2193650.1 Non Chatacterized Hit- tr|I1KT90|I1KT90_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,74.51,0.0000000000005,seg,NULL,
gene.Ljchr6_pseudomol_20120830.path1.gene4740.1
         (309 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70093 similar to UniRef100_A7PL25 Cluster: Chromosome...   170   3e-42

>gnl|LJGI|TC70093 similar to UniRef100_A7PL25 Cluster: Chromosome chr7 scaffold_20,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_20, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (21%)
          Length = 584

 Score =  170 bits (86), Expect = 3e-42
 Identities = 139/156 (89%), Gaps = 2/156 (1%)
 Strand = Plus / Plus

                                                                       
Query: 126 gaaaaggttcgagaagcaaagaaagccaagagagagg--agagaagctagggaaaaagcc 183
           |||||||||||||||||||||| |||| | |||||||  ||||||||||||  |||||||
Sbjct: 1   gaaaaggttcgagaagcaaagagagccnatagagaggcaagagaagctaggagaaaagcc 60

                                                                       
Query: 184 attgaagaaatgagcgaggagactagagctgcatttgagagtatggaatttcacaagttc 243
           |||||||||||||||||||| |||| |||||| |||||||||||| | ||| | ||||||
Sbjct: 61  attgaagaaatgagcgaggaaactaaagctgcctttgagagtatgaagttttataagttc 120

                                               
Query: 244 taccctgttcaatctccaaatgcacctgatatatca 279
           |||||||||||||||||| || |||||||| |||||
Sbjct: 121 taccctgttcaatctccagatacacctgatttatca 156