Miyakogusa Predicted Gene
- Lj6g3v2193570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2193570.1 Non Chatacterized Hit- tr|B9S9H5|B9S9H5_RICCO
Lipid binding protein, putative OS=Ricinus communis
GN,46.32,0.0000000000006,PRICHEXTENSN,NULL; seg,NULL,CUFF.60883.1
(445 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58711 similar to UniRef100_A7R0I7 Cluster: Chromosome... 882 0.0
gnl|LJGI|TC60401 similar to UniRef100_Q9LG09 Cluster: F14J16.29;... 468 e-131
gnl|LJGI|TC63180 similar to UniRef100_Q9LG09 Cluster: F14J16.29;... 289 7e-78
>gnl|LJGI|TC58711 similar to UniRef100_A7R0I7 Cluster: Chromosome undetermined
scaffold_310, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_310,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (36%)
Length = 800
Score = 882 bits (445), Expect = 0.0
Identities = 445/445 (100%)
Strand = Plus / Plus
Query: 1 atggcctcctactacaagtccttcatcatggccttctttttcattgctatttccttctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atggcctcctactacaagtccttcatcatggccttctttttcattgctatttccttctca 146
Query: 61 ggcatggacattagcatagcagctcgccatcttctgcagacagctccagttacaccaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ggcatggacattagcatagcagctcgccatcttctgcagacagctccagttacaccaact 206
Query: 121 ctaccaaaaccaacattgccaactctgcctccattcccaacattgcctactcagggagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ctaccaaaaccaacattgccaactctgcctccattcccaacattgcctactcagggagcc 266
Query: 181 aatcttccacctttgcctacaatgacaatcccatctcttcctacaattcccacaaatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aatcttccacctttgcctacaatgacaatcccatctcttcctacaattcccacaaatatt 326
Query: 241 ccaactctcccaaagtccactctgccaccacttcctgcagtcacttcacttccaacaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ccaactctcccaaagtccactctgccaccacttcctgcagtcacttcacttccaacaatc 386
Query: 301 cccaccaccatgccaaccaccatcccaaagttcgctctgccaccacttcctgcagtcact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cccaccaccatgccaaccaccatcccaaagttcgctctgccaccacttcctgcagtcact 446
Query: 361 tcactcccaaacttccccacaatcccaaccactatgccatcaatccctttcttttctcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tcactcccaaacttccccacaatcccaaccactatgccatcaatccctttcttttctcca 506
Query: 421 ccaccttccacaaccagcccctgaa 445
|||||||||||||||||||||||||
Sbjct: 507 ccaccttccacaaccagcccctgaa 531
>gnl|LJGI|TC60401 similar to UniRef100_Q9LG09 Cluster: F14J16.29; n=1; Arabidopsis
thaliana|Rep: F14J16.29 - Arabidopsis thaliana
(Mouse-ear cress), partial (18%)
Length = 769
Score = 468 bits (236), Expect = e-131
Identities = 371/420 (88%), Gaps = 27/420 (6%)
Strand = Plus / Plus
Query: 32 ccttctttttcattgctatttccttctcaggcatggacattagcatagcagctcgccatc 91
|||||||||||||||| |||| ||||||||||||| ||||| || |||||||||||||||
Sbjct: 110 ccttctttttcattgcaatttgcttctcaggcatgaacattggcctagcagctcgccatc 169
Query: 92 ttctgcag------acagctccagttacaccaactctaccaaaaccaacattgccaactc 145
|||||||| || |||| |||||||||||||| |||||||||||| |||||||||
Sbjct: 170 ttctgcagcagacaactcctcctgttacaccaactctgccaaaaccaacaatgccaactc 229
Query: 146 tgcctccattcccaacattgcctactcagggagccaatcttccacctttgcctacaatga 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tgcctccattcccaacattgcctactcagggagccaatcttccacctttgcctacaatga 289
Query: 206 caatcccatctcttcctacaattcccacaaatattccaactctcccaaagtccactctgc 265
||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 290 caatcccatctcttcct---------acaaatattccaactctcccaaagtccactctgc 340
Query: 266 caccacttcctgcagtcacttcacttccaacaatccccaccaccatgccaaccaccatcc 325
|||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 341 caccacttcctgcagtcacttcacttccaacaatcctc------------accaccatcc 388
Query: 326 caaagttcgctctgccaccacttcctgcagtcacttcactcccaaacttccccacaatcc 385
|||||||| ||||||||||||||||||| ||||||| | |||||||| ||||||||||
Sbjct: 389 caaagttcactctgccaccacttcctgctaccacttcattgccaaactttcccacaatcc 448
Query: 386 caaccactatgccatcaatccctttcttttctccaccaccttccacaaccagcccctgaa 445
||||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 449 caaccactatgccttccatccctttcttctcaccaccaccttccacaaccagcccctgaa 508
>gnl|LJGI|TC63180 similar to UniRef100_Q9LG09 Cluster: F14J16.29; n=1; Arabidopsis
thaliana|Rep: F14J16.29 - Arabidopsis thaliana
(Mouse-ear cress), partial (34%)
Length = 695
Score = 289 bits (146), Expect = 7e-78
Identities = 259/295 (87%), Gaps = 15/295 (5%)
Strand = Plus / Plus
Query: 1 atggcctcctactacaagtccttcatcatggccttctttttcattgctatttccttctca 60
||||||||||||||||||||| |||| |||| ||||||||||||||||||||||| |||
Sbjct: 72 atggcctcctactacaagtccatcatgttggctttctttttcattgctatttccttgtca 131
Query: 61 ggcatggacattagcatagcagctcgccatcttctgcagacagctccagttacaccaact 120
||||||||||| || |||||||||||||||||||||||||| ||| ||||||
Sbjct: 132 agcatggacattggcctagcagctcgccatcttctgcagaca-----agt----ccaact 182
Query: 121 ctaccaaaaccaacattgccaactctgcctccattcccaacattgcctactcagggagcc 180
|| ||||||||| |||||||||||||||||||| | |||||||| ||||||||||||
Sbjct: 183 ctgccaaaaccagcattgccaactctgcctccaattccaacattccctactcaggga--- 239
Query: 181 aatcttccacctttgcctacaatgacaatcccatctcttcctacaattcccacaaatatt 240
||||||||||| ||||| || | |||||||||||||||||||||||||||| ||||||
Sbjct: 240 aatcttccaccattgccaacta---caatcccatctcttcctacaattcccactaatatt 296
Query: 241 ccaactctcccaaagtccactctgccaccacttcctgcagtcacttcacttccaa 295
|||||||| ||||||| ||||||||| ||||||||||||||||||||||| ||||
Sbjct: 297 ccaactcttccaaagttcactctgccgccacttcctgcagtcacttcactcccaa 351
Score = 176 bits (89), Expect = 8e-44
Identities = 113/121 (93%)
Strand = Plus / Plus
Query: 325 ccaaagttcgctctgccaccacttcctgcagtcacttcactcccaaacttccccacaatc 384
||||||||| ||||||| ||||||||||||||||||||||||||||| || |||||||||
Sbjct: 306 ccaaagttcactctgccgccacttcctgcagtcacttcactcccaaattttcccacaatc 365
Query: 385 ccaaccactatgccatcaatccctttcttttctccaccaccttccacaaccagcccctga 444
|||||||||||||| || ||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 366 ccaaccactatgccctccatccctttcttctctccaccaccttccacaaccaccccctga 425
Query: 445 a 445
|
Sbjct: 426 a 426