Miyakogusa Predicted Gene

Lj6g3v2193560.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2193560.1 Non Chatacterized Hit- tr|H3DAU8|H3DAU8_TETNG
Uncharacterized protein (Fragment) OS=Tetraodon
nigrov,54.1,0.00006,seg,NULL,CUFF.60882.1
         (444 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64366                                                      876   0.0  

>gnl|LJGI|TC64366 
          Length = 653

 Score =  876 bits (442), Expect = 0.0
 Identities = 442/442 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaatggacttttggaacttgaagttcttccctatggtttaggaatcccaggtactcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atgaatggacttttggaacttgaagttcttccctatggtttaggaatcccaggtactcca 385

                                                                       
Query: 61  ggcactttaggcacatctggtattccaggcactttaggaacctctggtattccaggcact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggcactttaggcacatctggtattccaggcactttaggaacctctggtattccaggcact 325

                                                                       
Query: 121 tcaggaatcttaggaactccaggcacttcaggcacctttggtattccaggcacatcaggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcaggaatcttaggaactccaggcacttcaggcacctttggtattccaggcacatcaggc 265

                                                                       
Query: 181 attggaagagcaggcaaacctggctgtggaagggatggaagtggcactggcagagtaggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 attggaagagcaggcaaacctggctgtggaagggatggaagtggcactggcagagtaggg 205

                                                                       
Query: 241 atcacagaaggcaactcaagtttggaaagtttgtgtatttttgacaattgtggcaggtta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 atcacagaaggcaactcaagtttggaaagtttgtgtatttttgacaattgtggcaggtta 145

                                                                       
Query: 301 cgtgcctctgcaacacttgtgtcactgataaatgatgagaaggttacaagtagaagtggg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 cgtgcctctgcaacacttgtgtcactgataaatgatgagaaggttacaagtagaagtggg 85

                                                                       
Query: 361 aaaacgaatgacaagaaactgagagccatttttggagctaacagaagacagagcagtcta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84  aaaacgaatgacaagaaactgagagccatttttggagctaacagaagacagagcagtcta 25

                                 
Query: 421 tgcaaatggttctggtatgctt 442
           ||||||||||||||||||||||
Sbjct: 24  tgcaaatggttctggtatgctt 3