Miyakogusa Predicted Gene

Lj6g3v2193480.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2193480.1 Non Chatacterized Hit- tr|G4A7R1|G4A7R1_AGGAC
Putative uncharacterized protein OS=Aggregatibacter ac,33.33,1.6,
,CUFF.60870.1
         (567 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS354322 UniRef100_Q16ZB3 Cluster: Thyroid hormone rece...   716   0.0  

>gnl|LJGI|FS354322 UniRef100_Q16ZB3 Cluster: Thyroid hormone receptor-associated
           protein; n=1; Aedes aegypti|Rep: Thyroid hormone,
           partial (0%)
          Length = 666

 Score =  716 bits (361), Expect = 0.0
 Identities = 361/361 (100%)
 Strand = Plus / Minus

                                                                       
Query: 207 ccagagcattgaagagtttaaccctacagacaagacagcacttgcgtatttatcaaccta 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ccagagcattgaagagtttaaccctacagacaagacagcacttgcgtatttatcaaccta 607

                                                                       
Query: 267 tgaggaggagctcggagactccattgttcaagattctcaagaggcaaatgttgagcatga 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tgaggaggagctcggagactccattgttcaagattctcaagaggcaaatgttgagcatga 547

                                                                       
Query: 327 tgttgatgtgaatgttaaatctcattccttattccgagaaaacgctaattcagtagccca 386
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tgttgatgtgaatgttaaatctcattccttattccgagaaaacgctaattcagtagccca 487

                                                                       
Query: 387 tccagtttttgatttgactcacatgagtcttgatgatgatgttatatttatcaaggaaga 446
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tccagtttttgatttgactcacatgagtcttgatgatgatgttatatttatcaaggaaga 427

                                                                       
Query: 447 gtcactagcatctgaatctaatgaacgagatgccaaaaggccgaagcttatgaatgcaac 506
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gtcactagcatctgaatctaatgaacgagatgccaaaaggccgaagcttatgaatgcaac 367

                                                                       
Query: 507 aggtggttcaagtggaagacgacctttcactagaagcaggttaaaagaagcatatgttta 566
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aggtggttcaagtggaagacgacctttcactagaagcaggttaaaagaagcatatgttta 307

            
Query: 567 a 567
           |
Sbjct: 306 a 306