Miyakogusa Predicted Gene

Lj6g3v2192110.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2192110.1 Non Chatacterized Hit- tr|A7UQS8|A7UQS8_MEDTR
Metal ion transporter , putative OS=Medicago truncatul,85.19,0,no
description,NULL; coiled-coil,NULL; seg,NULL; CorA,Mg2+ transporter
protein, CorA-like/Zinc trans,CUFF.60756.1
         (1398 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81090 similar to UniRef100_A7QS94 Cluster: Chromosome...  1181   0.0  

>gnl|LJGI|TC81090 similar to UniRef100_A7QS94 Cluster: Chromosome chr3 scaffold_157,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_157, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (25%)
          Length = 964

 Score = 1181 bits (596), Expect = 0.0
 Identities = 603/604 (99%), Gaps = 1/604 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaactagctcagcggagagtattggagaatggcgaggcggaggagatggaagttgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atggaactagctcagcggagagtattggagaatggcgaggcggaggagatggaagttgag 420

                                                                       
Query: 61  attccggctgaagagcatcgaatctaccattcccatcctgcaagcttcgtcaagaagagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attccggctgaagagcatcgaatctaccattcccatcctgcaagcttcgtcaagaagagg 480

                                                                       
Query: 121 gcttatgtatttgatggtttagggaatttt-tataataaggattgggatctggcatacct 179
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 481 gcttatgtatttgatggtttagggaattttttataataaggattgggatctggcatacct 540

                                                                       
Query: 180 ttataaaaaagacgaaagggaaacagttggagttgaaggccgagagaatgagttttcttg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttataaaaaagacgaaagggaaacagttggagttgaaggccgagagaatgagttttcttg 600

                                                                       
Query: 240 gtaccatgtagaactccctaaaggaaatcagaagttgtcgcaatccgcgcaggacttgat 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtaccatgtagaactccctaaaggaaatcagaagttgtcgcaatccgcgcaggacttgat 660

                                                                       
Query: 300 cggtgttctctgcccgccgttgaagctacaagatattctctcgcttgttagtaatggacc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cggtgttctctgcccgccgttgaagctacaagatattctctcgcttgttagtaatggacc 720

                                                                       
Query: 360 cttttgtgcatatgtagatggggcgcttgtcttccgggttaattcaccaggacctccttc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cttttgtgcatatgtagatggggcgcttgtcttccgggttaattcaccaggacctccttc 780

                                                                       
Query: 420 tagtgactttacatttagaattgctgctagagttacggagaattcggtaattactgtgtc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tagtgactttacatttagaattgctgctagagttacggagaattcggtaattactgtgtc 840

                                                                       
Query: 480 tttggggcgtgttccccggctaggtttctcacgcatgggcgaatctctactttcggaaat 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tttggggcgtgttccccggctaggtttctcacgcatgggcgaatctctactttcggaaat 900

                                                                       
Query: 540 tcctagtgttgaaagctcttctaattttagaggtcagcagaaggaaaaaagtgggactgt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tcctagtgttgaaagctcttctaattttagaggtcagcagaaggaaaaaagtgggactgt 960

               
Query: 600 gatt 603
           ||||
Sbjct: 961 gatt 964