Miyakogusa Predicted Gene

Lj6g3v2172020.3

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2172020.3 Non Chatacterized Hit- tr|B5U9W2|B5U9W2_LOTJA
Putative uncharacterized protein OS=Lotus japonicus
PE,38.82,0.00000002,CHROMO_2,Chromo domain/shadow; seg,NULL;
Chromo,Chromo domain; no description,NULL,CUFF.60758.3
         (503 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73005                                                      270   8e-72
gnl|LJGI|TC80541                                                       54   9e-07
gnl|LJGI|TC76376 similar to UniRef100_Q1JX87 Cluster: Cytochrome...    54   9e-07
gnl|LJGI|TC63699                                                       54   9e-07

>gnl|LJGI|TC73005 
          Length = 812

 Score =  270 bits (136), Expect = 8e-72
 Identities = 136/136 (100%)
 Strand = Plus / Minus

                                                                       
Query: 368 agatgataggaacccagatattagtagtcctagtattgctaaggtatttgttaggaaggg 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 agatgataggaacccagatattagtagtcctagtattgctaaggtatttgttaggaaggg 576

                                                                       
Query: 428 tagaaagggaaataaaattgattcccactagtgataactgccaagctgatgtggcagtat 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tagaaagggaaataaaattgattcccactagtgataactgccaagctgatgtggcagtat 516

                           
Query: 488 cttcagggtgctagga 503
           ||||||||||||||||
Sbjct: 515 cttcagggtgctagga 500


>gnl|LJGI|TC80541 
          Length = 783

 Score = 54.0 bits (27), Expect = 9e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 329 ttccatccttgaggacaaggatgtttt 355
           |||||||||||||||||||||||||||
Sbjct: 433 ttccatccttgaggacaaggatgtttt 459


>gnl|LJGI|TC76376 similar to UniRef100_Q1JX87 Cluster: Cytochrome c assembly protein;
           n=1; Desulfuromonas acetoxidans DSM 684|Rep: Cytochrome
           c assembly protein - Desulfuromonas acetoxidans DSM 684,
           partial (6%)
          Length = 1236

 Score = 54.0 bits (27), Expect = 9e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 329 ttccatccttgaggacaaggatgtttt 355
           |||||||||||||||||||||||||||
Sbjct: 937 ttccatccttgaggacaaggatgtttt 963


>gnl|LJGI|TC63699 
          Length = 738

 Score = 54.0 bits (27), Expect = 9e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 329 ttccatccttgaggacaaggatgtttt 355
           |||||||||||||||||||||||||||
Sbjct: 452 ttccatccttgaggacaaggatgtttt 478