Miyakogusa Predicted Gene
- Lj6g3v2172020.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2172020.2 tr|Q9LWB7|Q9LWB7_CHERU Sucrose synthase
OS=Chenopodium rubrum GN=CSS1 PE=2 SV=1,70.76,0,Sucrose_synth,Sucrose
synthase; UDP-Glycosyltransferase/glycogen phosphorylase,NULL; SUCROSE
SYNTHAS,CUFF.60758.2
(867 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77381 homologue to UniRef100_P13708 Cluster: Sucrose ... 757 0.0
gnl|LJGI|TC72460 homologue to UniRef100_Q9AVR8 Cluster: Sucrose ... 329 2e-89
gnl|LJGI|TC78224 similar to UniRef100_O81610 Cluster: Nodule-enh... 285 2e-76
gnl|LJGI|TC73005 266 2e-70
gnl|LJGI|BW625229 homologue to UniRef100_P13708 Cluster: Sucrose... 131 8e-30
gnl|LJGI|TC79242 homologue to UniRef100_O24301 Cluster: Sucrose ... 111 7e-24
>gnl|LJGI|TC77381 homologue to UniRef100_P13708 Cluster: Sucrose synthase; n=1; Glycine
max|Rep: Sucrose synthase - Glycine max (Soybean),
partial (90%)
Length = 2282
Score = 757 bits (382), Expect = 0.0
Identities = 415/426 (97%)
Strand = Plus / Plus
Query: 1 atgttgaatgacaggattcaaaccccgaatgctctccaacatgttctgaggaaagctgaa 60
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 636 atgttgaatgacaggattcagaccccaaatgctctccaacatgttctgaggaaagctgaa 695
Query: 61 gagttcttaggcacacttcctcttgagacaccttactcagaatttgaacacaggttccag 120
|||| | |||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 696 gagtacctaggcacacttcctcttgagacaccttactcagaatttgagcacaagttccag 755
Query: 121 gaaattggtttggagagagggtggggtgacactgctgagcgtgtccttgagtccattcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gaaattggtttggagagagggtggggtgacactgctgagcgtgtccttgagtccattcaa 815
Query: 181 ctcctcttggatcttcttgaggcacctgacccgtgcaccctcaaaactttcctaggaaga 240
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 816 ctccttttggatcttcttgaggcacctgacccgtgcaccctcgaaactttcctaggaaga 875
Query: 241 atccctatggtctttaatgtggtgatcctttcaccccatggttactttgctcaagacaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 atccctatggtctttaatgtggtgatcctttcaccccatggttactttgctcaagacaat 935
Query: 301 gtcttgggataccctgatactggtggccaggttgtgtacatcttggatcaagtgcgtgca 360
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 936 gtcttgggttaccctgatactggtggccaggttgtttacatcttggatcaagtgcgtgca 995
Query: 361 ttggagaatgagatgctccaacgcattaagcaacaaggcttggatattgttcctcgcatt 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 ttggagagtgagatgctccaacgcattaagcaacaaggcttggatattgttcctcgcatt 1055
Query: 421 ctcatt 426
||||||
Sbjct: 1056 ctcatt 1061
Score = 553 bits (279), Expect = e-157
Identities = 300/307 (97%)
Strand = Plus / Plus
Query: 427 gatgttgctcatgagcttgccaaagagttgcaagggaagcctgatctgatcgttggaaac 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1236 gatgttgctcatgagcttgccaaagagttgcaagggaagcctgatctgatcgttggaaac 1295
Query: 487 tatagtgatggaaacatcgttgcctcttcattggcacataaattgggtgttactcagtgt 546
|| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 1296 tacagtgatggaaacatcgttgcctctttgttggcacataaattgggtgtcactcagtgt 1355
Query: 547 accattgctcatgcacttgagaagaccaaataccccgaatccgacatctactggaagaaa 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1356 accattgctcatgcacttgagaagaccaaataccccgaatccgacatctactggaagaaa 1415
Query: 607 ttcgaagagaagtatcacttctcatgccaattcacagctgatctctttgcaatgaaccac 666
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 1416 ttcgaagagaagtatcacttctcatgccaatttacagctgatctctttgcaatgaatcac 1475
Query: 667 actgacttcatcatcaccagtacattccaagagattgctggaagcaaggatactgttgga 726
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1476 actgacttcatcatcaccagtacattccaagagattgctggaagcaaggatactgtagga 1535
Query: 727 cagtatg 733
|||||||
Sbjct: 1536 cagtatg 1542
>gnl|LJGI|TC72460 homologue to UniRef100_Q9AVR8 Cluster: Sucrose synthase isoform 3;
n=1; Pisum sativum|Rep: Sucrose synthase isoform 3 -
Pisum sativum (Garden pea), partial (50%)
Length = 1225
Score = 329 bits (166), Expect = 2e-89
Identities = 256/286 (89%)
Strand = Plus / Plus
Query: 446 ccaaagagttgcaagggaagcctgatctgatcgttggaaactatagtgatggaaacatcg 505
|||| |||||||| || ||||| |||||||| ||||||||||| |||||||||||||| |
Sbjct: 316 ccaaggagttgcagggcaagccagatctgatagttggaaactacagtgatggaaacattg 375
Query: 506 ttgcctcttcattggcacataaattgggtgttactcagtgtaccattgctcatgcacttg 565
||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 376 ttgcctctttgttggcacataaattaggtgtaactcagtgtactattgctcatgcacttg 435
Query: 566 agaagaccaaataccccgaatccgacatctactggaagaaattcgaagagaagtatcact 625
||||||| || ||||| || || |||||||||||||| ||||| |||||||| |||||||
Sbjct: 436 agaagacaaagtaccctgagtctgacatctactggaaaaaatttgaagagaaatatcact 495
Query: 626 tctcatgccaattcacagctgatctctttgcaatgaaccacactgacttcatcatcacca 685
||||| ||||||||| |||||||| ||||||||||||||||| |||||||| |||||||
Sbjct: 496 tctcagcccaattcactgctgatctttttgcaatgaaccacacagacttcattatcacca 555
Query: 686 gtacattccaagagattgctggaagcaaggatactgttggacagta 731
|||| |||||||||||||||||||||||||| | |||||||||||
Sbjct: 556 gtaccttccaagagattgctggaagcaaggacaaagttggacagta 601
Score = 99.6 bits (50), Expect = 3e-20
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 314 ctgatactggtggccaggttgtgtacatcttggatcaagtgcgtgcattggagaatgaga 373
|||||||||| || |||||||| ||||||||||||||||| ||||| |||||||||||||
Sbjct: 10 ctgatactggaggacaggttgtttacatcttggatcaagttcgtgccttggagaatgaga 69
Query: 374 tgctccaacgcattaagcaacaaggcttggatat 407
|||| ||||| ||| ||||||||||||||||
Sbjct: 70 tgctaagtcgcatcaagaaacaaggcttggatat 103
>gnl|LJGI|TC78224 similar to UniRef100_O81610 Cluster: Nodule-enhanced sucrose
synthase; n=1; Pisum sativum|Rep: Nodule-enhanced sucrose
synthase - Pisum sativum (Garden pea), partial (56%)
Length = 1536
Score = 285 bits (144), Expect = 2e-76
Identities = 276/320 (86%)
Strand = Plus / Plus
Query: 88 acaccttactcagaatttgaacacaggttccaggaaattggtttggagagagggtggggt 147
||||| ||||| ||||||||||| | |||||||| ||||||||||||||||| ||||||
Sbjct: 842 acaccctactctgaatttgaacataaattccaggagattggtttggagagaggatggggt 901
Query: 148 gacactgctgagcgtgtccttgagtccattcaactcctcttggatcttcttgaggcacct 207
|||||||||||||||||||| ||| ||||| || || ||||||||| | ||||||||
Sbjct: 902 gacactgctgagcgtgtcctcgagatgattcagcttctgttggatcttttcgaggcaccg 961
Query: 208 gacccgtgcaccctcaaaactttcctaggaagaatccctatggtctttaatgtggtgatc 267
|| || | ||||||| | | ||||| |||||||||||||||||||| ||||| || |||
Sbjct: 962 gatcctttcaccctcgagaaattccttggaagaatccctatggtcttcaatgttgttatc 1021
Query: 268 ctttcaccccatggttactttgctcaagacaatgtcttgggataccctgatactggtggc 327
||||| |||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||
Sbjct: 1022 ctttctccccatggatactttgcccaagataatgtcttaggataccctgatactggagga 1081
Query: 328 caggttgtgtacatcttggatcaagtgcgtgcattggagaatgagatgctccaacgcatt 387
|||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||
Sbjct: 1082 caggttgtttacatcttggatcaagttcgtgccttggagaatgagatgctaagtcgcatc 1141
Query: 388 aagcaacaaggcttggatat 407
||| ||||||||||||||||
Sbjct: 1142 aagaaacaaggcttggatat 1161
Score = 157 bits (79), Expect = 1e-37
Identities = 142/163 (87%)
Strand = Plus / Plus
Query: 446 ccaaagagttgcaagggaagcctgatctgatcgttggaaactatagtgatggaaacatcg 505
|||| |||| ||| || ||||| |||||||| ||||||||||| || ||||||||||| |
Sbjct: 1374 ccaaggagtggcagggcaagccagatctgatagttggaaactacagggatggaaacatgg 1433
Query: 506 ttgcctcttcattggcacataaattgggtgttactcagtgtaccattgctcatgcacttg 565
||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 1434 ttgcctcttggttggcacataaattaggtgtaactcagtgtactattgctcatgcacttg 1493
Query: 566 agaagaccaaataccccgaatccgacatctactggaagaaatt 608
||||||| | ||||| || || |||||||||||||| |||||
Sbjct: 1494 agaagacaacgtaccctgagtctgacatctactggaataaatt 1536
>gnl|LJGI|TC73005
Length = 812
Score = 266 bits (134), Expect = 2e-70
Identities = 134/134 (100%)
Strand = Plus / Minus
Query: 734 tgataggaacccagatattagtagtcctagtattgctaaggtatttgttaggaagggtag 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tgataggaacccagatattagtagtcctagtattgctaaggtatttgttaggaagggtag 573
Query: 794 aaagggaaataaaattgattcccactagtgataactgccaagctgatgtggcagtatctt 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aaagggaaataaaattgattcccactagtgataactgccaagctgatgtggcagtatctt 513
Query: 854 cagggtgctaggag 867
||||||||||||||
Sbjct: 512 cagggtgctaggag 499
>gnl|LJGI|BW625229 homologue to UniRef100_P13708 Cluster: Sucrose synthase; n=1;
Glycine max|Rep: Sucrose synthase - Glycine max
(Soybean), partial (19%)
Length = 515
Score = 131 bits (66), Expect = 8e-30
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 664 cacactgacttcatcatcaccagtacattccaagagattgctggaagcaaggatactgtt 723
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacactgacttcatcatcaccagtacattccaagagattgctggaagcaaggatactgta 120
Query: 724 ggacagtatg 733
||||||||||
Sbjct: 121 ggacagtatg 130
>gnl|LJGI|TC79242 homologue to UniRef100_O24301 Cluster: Sucrose synthase 2; n=1;
Pisum sativum|Rep: Sucrose synthase 2 - Pisum sativum
(Garden pea), partial (59%)
Length = 1831
Score = 111 bits (56), Expect = 7e-24
Identities = 215/268 (80%)
Strand = Plus / Plus
Query: 466 cctgatctgatcgttggaaactatagtgatggaaacatcgttgcctcttcattggcacat 525
|||||| | ||| |||||||||| |||||||| ||| | ||||| |||| |||||| ||
Sbjct: 235 cctgattttatcattggaaactacagtgatgggaaccttgttgcatctttattggcttat 294
Query: 526 aaattgggtgttactcagtgtaccattgctcatgcacttgagaagaccaaataccccgaa 585
||| |||| ||||| ||||| || ||||| |||||||| |||||||| ||||| || ||
Sbjct: 295 aaaatgggagttacacagtgcacaattgcgcatgcactggagaagacaaaatatccagat 354
Query: 586 tccgacatctactggaagaaattcgaagagaagtatcacttctcatgccaattcacagct 645
|| || || || ||||||||||| || || || || || || |||| || ||||| |||
Sbjct: 355 tcagatatatattggaagaaatttgaggacaaataccattttgcatgtcagttcactgct 414
Query: 646 gatctctttgcaatgaaccacactgacttcatcatcaccagtacattccaagagattgct 705
||||| | || |||||| | |||| || |||||||||||||||| ||||||||||||
Sbjct: 415 gatctgatagccatgaacaatgctgattttatcatcaccagtacataccaagagattgca 474
Query: 706 ggaagcaaggatactgttggacagtatg 733
|||| || |||||||||| |||||||
Sbjct: 475 ggaacgaaaaatactgttgggcagtatg 502