Miyakogusa Predicted Gene

Lj6g3v2171960.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2171960.1 Non Chatacterized Hit- tr|Q9FGE8|Q9FGE8_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,47.15,2e-19,seg,NULL,CUFF.60743.1
         (477 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77864 UniRef100_Q0FDA7 Cluster: Prephenate dehydratas...   938   0.0  

>gnl|LJGI|TC77864 UniRef100_Q0FDA7 Cluster: Prephenate dehydratase; n=1; alpha
           proteobacterium HTCC2255|Rep: Prephenate dehydratase -
           alpha proteobacterium HTCC2255, partial (5%)
          Length = 649

 Score =  938 bits (473), Expect = 0.0
 Identities = 476/477 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctctcaagatttatcaaattcccactctcttcaccaattcccctgtcactctcttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57  atggctctcaagatttatcaaattcccactctcttcaccaattcccctgtcactctcttc 116

                                                                       
Query: 61  atcacccgccacaacctcaccacgcgaatctcatgcagcggcagcggcggcatcagcgac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atcacccgccacaacctcaccacgcgaatctcatgcagcggcagcggcggcatcagcgac 176

                                                                       
Query: 121 gccgcactcgcatcagagctagccgcaagggccaccagaatcaacgcccgcgcggtgcta 180
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 177 gccgcactcgcatcagagctacccgcaagggccaccagaatcaacgcccgcgcggtgcta 236

                                                                       
Query: 181 gcagaggacgctatgaggaagagcagaaagatcctattccgagagctctgcgaatatctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gcagaggacgctatgaggaagagcagaaagatcctattccgagagctctgcgaatatctg 296

                                                                       
Query: 241 ggcctcaaggaagacgaggccagagagaattggagcaagatgggtgaagacgagaaattg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ggcctcaaggaagacgaggccagagagaattggagcaagatgggtgaagacgagaaattg 356

                                                                       
Query: 301 gtgctggtcaaagggttcgttgcagagtggggttcctgttttcatccattgtcagctagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gtgctggtcaaagggttcgttgcagagtggggttcctgttttcatccattgtcagctagg 416

                                                                       
Query: 361 tctaccaaacaaatggtggaggaatatctgaacgcaccgccaccaaattcacctcattct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tctaccaaacaaatggtggaggaatatctgaacgcaccgccaccaaattcacctcattct 476

                                                                    
Query: 421 gatacttcttcttctgccttgtttccaggattcaagaggataattggttttccttag 477
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gatacttcttcttctgccttgtttccaggattcaagaggataattggttttccttag 533