Miyakogusa Predicted Gene
- Lj6g3v2171950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2171950.1 Non Chatacterized Hit- tr|I1ME36|I1ME36_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,86.75,0,RING/U-box,NULL; seg,NULL; C-terminal to LisH
motif.,CTLH, C-terminal LisH motif; CT11-RanBPM,CRA do,CUFF.60744.1
(1157 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58035 similar to UniRef100_A7QSA7 Cluster: Chromosome... 1394 0.0
gnl|LJGI|TC63077 homologue to UniRef100_A2Q1B6 Cluster: Zinc fin... 797 0.0
gnl|LJGI|TC62339 similar to UniRef100_A7QSA7 Cluster: Chromosome... 52 8e-06
>gnl|LJGI|TC58035 similar to UniRef100_A7QSA7 Cluster: Chromosome chr3 scaffold_157,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_157, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (58%)
Length = 814
Score = 1394 bits (703), Expect = 0.0
Identities = 706/707 (99%)
Strand = Plus / Plus
Query: 1 atggagctgagtagcatcaaagatgcatttgaccgtgtggctaagaagcaaaagctatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 atggagctgagtagcatcaaagatgcatttgaccgtgtggctaagaagcaaaagctatcc 167
Query: 61 tcttccaagtctcaggaagttgttgaccaagtgggtcgtgaaattgagcaggcattggca 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 tcttccaaatctcaggaagttgttgaccaagtgggtcgtgaaattgagcaggcattggca 227
Query: 121 accattcagtcaccacatgacccctcaattcttgatcagaaatctattcttacagaactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 accattcagtcaccacatgacccctcaattcttgatcagaaatctattcttacagaactt 287
Query: 181 aagagtaagctgaatgctattggggcacttcaacagttagaaggatcacataaggaatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 aagagtaagctgaatgctattggggcacttcaacagttagaaggatcacataaggaatgg 347
Query: 241 aaccaaagtctctcaaagtatcaaaaactccttgaaaaattgttcaaccctgacatatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aaccaaagtctctcaaagtatcaaaaactccttgaaaaattgttcaaccctgacatatca 407
Query: 301 aaggcatacagaaatgtggactttgacacacatattatcaaccagattattgcaagccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aaggcatacagaaatgtggactttgacacacatattatcaaccagattattgcaagccac 467
Query: 361 ttttaccgtcaaggtttatctgatcttggtgatagcatcattaatgaggctggagagcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ttttaccgtcaaggtttatctgatcttggtgatagcatcattaatgaggctggagagcct 527
Query: 421 gaagcaactgcactgagatctcagttcttggaaatgcacaagattattgaagctatgagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gaagcaactgcactgagatctcagttcttggaaatgcacaagattattgaagctatgagg 587
Query: 481 ggtagaaacattcagcctgctctctcatgggtcactgccaatcaagagagacttgccaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ggtagaaacattcagcctgctctctcatgggtcactgccaatcaagagagacttgccaag 647
Query: 541 attggttccaatcttgagcttaagatccacacgctgcagtttgtagatgttctgcaaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 attggttccaatcttgagcttaagatccacacgctgcagtttgtagatgttctgcaaact 707
Query: 601 ggaactcgagctgatgccctgaaatatgcccggacatatctttctcctttcgcttccatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 ggaactcgagctgatgccctgaaatatgcccggacatatctttctcctttcgcttccatc 767
Query: 661 aacaaggatgagttccaaaagcttatgggctgcctcttgtatgctgg 707
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 aacaaggatgagttccaaaagcttatgggctgcctcttgtatgctgg 814
>gnl|LJGI|TC63077 homologue to UniRef100_A2Q1B6 Cluster: Zinc finger, RING-type; n=1;
Medicago truncatula|Rep: Zinc finger, RING-type -
Medicago truncatula (Barrel medic), partial (78%)
Length = 733
Score = 797 bits (402), Expect = 0.0
Identities = 405/406 (99%)
Strand = Plus / Plus
Query: 752 attgggagatgacaactgaagagctggcacggcagttctgcactctcatggggcagtcct 811
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 attgggagatgacaactgaagagctggcacgccagttctgcactctcatggggcagtcct 60
Query: 812 atgagagcccactgagtatggcagttgcagctggagttgcggggttgcctacactgttaa 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgagagcccactgagtatggcagttgcagctggagttgcggggttgcctacactgttaa 120
Query: 872 agctggcaaatgtaatggcagcaaagaagcaggagtggcaggaaatgaaacaattgccgg 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agctggcaaatgtaatggcagcaaagaagcaggagtggcaggaaatgaaacaattgccgg 180
Query: 932 tgcctgtagatttgggtaaggagtttcagttccattcgatttttgtttgccctgtgagca 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcctgtagatttgggtaaggagtttcagttccattcgatttttgtttgccctgtgagca 240
Query: 992 gggatcaaggtagtgatgagaatcctccaatgctgcttccatgttcacacgtcctttgca 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggatcaaggtagtgatgagaatcctccaatgctgcttccatgttcacacgtcctttgca 300
Query: 1052 aacaatcaattgccaagttgtccaaaaacagcacgcgaacattcaagtgtccatattgtc 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacaatcaattgccaagttgtccaaaaacagcacgcgaacattcaagtgtccatattgtc 360
Query: 1112 cagcggaagctactgttgcacactgcagacagctgtatttctgatg 1157
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagcggaagctactgttgcacactgcagacagctgtatttctgatg 406
>gnl|LJGI|TC62339 similar to UniRef100_A7QSA7 Cluster: Chromosome chr3 scaffold_157,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_157, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 964
Score = 52.0 bits (26), Expect = 8e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 1 atggagctgagtagcatcaaagatgcatttgaccgtgtggctaagaagcaaaag 54
|||||||| |||| || |||||||| ||||||||||| ||||||||||||||
Sbjct: 276 atggagcttagtactattaaagatgcttttgaccgtgttactaagaagcaaaag 329