Miyakogusa Predicted Gene
- Lj6g3v2171910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2171910.1 Non Chatacterized Hit- tr|G4Z371|G4Z371_PHYSP
Putative uncharacterized protein OS=Phytophthora
sojae,26.75,2e-18,seg,NULL; MFS_1,Major facilitator superfamily;
TRANSPORTER-RELATED,NULL; MAJOR FACILITATOR SUPERFAMI,CUFF.60742.1
(1161 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS342204 similar to UniRef100_A7R621 Cluster: Chromosom... 107 2e-22
gnl|LJGI|TC60907 107 2e-22
gnl|LJGI|TC78423 similar to UniRef100_A7R621 Cluster: Chromosome... 68 1e-10
>gnl|LJGI|FS342204 similar to UniRef100_A7R621 Cluster: Chromosome undetermined
scaffold_1132, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1132,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (42%)
Length = 815
Score = 107 bits (54), Expect = 2e-22
Identities = 96/110 (87%)
Strand = Plus / Plus
Query: 8 ttggtgttggtgaggcttcgtttataagtcttgcagcaccttttattgatgacaatgctc 67
||||||| ||||||||||| || ||||||||||||||||| || || ||||||||||| |
Sbjct: 635 ttggtgtgggtgaggcttccttcataagtcttgcagcaccattcatagatgacaatgccc 694
Query: 68 cagctgctcagaaaacagcatggcttggaatattttgcatgtgtatacca 117
| | ||| ||||||||||||||||||| | ||||| |||||||||||||
Sbjct: 695 ctgttgcacagaaaacagcatggcttgctacattttacatgtgtatacca 744
>gnl|LJGI|TC60907
Length = 1934
Score = 107 bits (54), Expect = 2e-22
Identities = 96/110 (87%)
Strand = Plus / Plus
Query: 8 ttggtgttggtgaggcttcgtttataagtcttgcagcaccttttattgatgacaatgctc 67
||||||| ||||||||||| || ||||||||||||||||| || || ||||||||||| |
Sbjct: 514 ttggtgtgggtgaggcttccttcataagtcttgcagcaccattcatagatgacaatgccc 573
Query: 68 cagctgctcagaaaacagcatggcttggaatattttgcatgtgtatacca 117
| | ||| ||||||||||||||||||| | ||||| |||||||||||||
Sbjct: 574 ctgttgcacagaaaacagcatggcttgctacattttacatgtgtatacca 623
Score = 52.0 bits (26), Expect = 8e-06
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 775 ttctgtatcggtgaacttcttgtttttgccactcagggtcctgtgaattttgtatgtctc 834
|||| |||||||||||| || |||| |||||||| | |||||| |||| ||| | ||||
Sbjct: 1243 ttctctatcggtgaactgctgattttcgccactcaagctcctgtaaattatgtttctctc 1302
Query: 835 cattgtgttgaaccaagtatgagacctctatctatggc 872
| |||||| |||||||| |||| || || ||||||||
Sbjct: 1303 cgttgtgtaaaaccaagtttgaggccgctttctatggc 1340
>gnl|LJGI|TC78423 similar to UniRef100_A7R621 Cluster: Chromosome undetermined
scaffold_1132, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1132,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (42%)
Length = 956
Score = 67.9 bits (34), Expect = 1e-10
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 8 ttggtgttggtgaggcttcgtttataagtcttgcagcaccttttattgatgacaatgc 65
||||||| ||||||||||| || ||||||||||||||||| || || |||||||||||
Sbjct: 567 ttggtgtgggtgaggcttccttcataagtcttgcagcaccattcatagatgacaatgc 624
Score = 52.0 bits (26), Expect = 8e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 76 cagaaaacagcatggcttggaatattttgcatgtgtatacca 117
||||||||||||||||||| | ||||| |||||||||||||
Sbjct: 730 cagaaaacagcatggcttgctacattttacatgtgtatacca 771