Miyakogusa Predicted Gene
- Lj6g3v2171830.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2171830.1 tr|O81348|O81348_SOYBN Symbiotic ammonium
transporter OS=Glycine max GN=SAT1 PE=2 SV=1,68.3,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain;
HLH,Helix-loop-helix domain; coile,CUFF.60734.1
(948 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS327613 similar to UniRef100_O81348 Cluster: Symbiotic... 890 0.0
gnl|LJGI|FS353944 similar to UniRef100_O81348 Cluster: Symbiotic... 299 2e-80
gnl|LJGI|TC79026 similar to UniRef100_O81348 Cluster: Symbiotic ... 214 8e-55
gnl|LJGI|TC71042 similar to UniRef100_O81348 Cluster: Symbiotic ... 212 3e-54
gnl|LJGI|TC80043 similar to UniRef100_O81348 Cluster: Symbiotic ... 161 1e-38
gnl|LJGI|TC67128 weakly similar to UniRef100_A7R3V3 Cluster: Chr... 78 1e-13
gnl|LJGI|TC73883 similar to UniRef100_Q1PF17 Cluster: Basic heli... 58 1e-07
>gnl|LJGI|FS327613 similar to UniRef100_O81348 Cluster: Symbiotic ammonium
transporter; n=1; Glycine max|Rep: Symbiotic ammonium
transporter - Glycine max (Soybean), partial (23%)
Length = 794
Score = 890 bits (449), Expect = 0.0
Identities = 449/449 (100%)
Strand = Plus / Plus
Query: 1 atgcatatggagatttcatctttacctgaacaggggttgatagaggatcctaacttcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 atgcatatggagatttcatctttacctgaacaggggttgatagaggatcctaacttcctc 405
Query: 61 caccagtggcgctttggctctattgatcccccaagcttaacagcttccgctgcttttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 caccagtggcgctttggctctattgatcccccaagcttaacagcttccgctgcttttgga 465
Query: 121 gaggctttgcaaaaacattcattcactaataatagcccaaacttcaaccacaaaacttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gaggctttgcaaaaacattcattcactaataatagcccaaacttcaaccacaaaacttct 525
Query: 181 actgatacacaatatgcttcctgccaaaatctgatttcatttgctgattcaagtcatcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 actgatacacaatatgcttcctgccaaaatctgatttcatttgctgattcaagtcatcac 585
Query: 241 atgaatcaattgggactagtgaggcctaaagaggagatggagagtcctaaaattgataac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 atgaatcaattgggactagtgaggcctaaagaggagatggagagtcctaaaattgataac 645
Query: 301 actgctctcgcaaacatgttgatctctcaaggagccttcatgaatcaaaactatgccttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 actgctctcgcaaacatgttgatctctcaaggagccttcatgaatcaaaactatgccttc 705
Query: 361 aaagcttgccaggaggataaaaagattggggcatgtcataaactttctcaacctcatcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 aaagcttgccaggaggataaaaagattggggcatgtcataaactttctcaacctcatcat 765
Query: 421 gagcatgtaattgctgaaaggaagcggcg 449
|||||||||||||||||||||||||||||
Sbjct: 766 gagcatgtaattgctgaaaggaagcggcg 794
>gnl|LJGI|FS353944 similar to UniRef100_O81348 Cluster: Symbiotic ammonium
transporter; n=1; Glycine max|Rep: Symbiotic ammonium
transporter - Glycine max (Soybean), partial (13%)
Length = 674
Score = 299 bits (151), Expect = 2e-80
Identities = 151/151 (100%)
Strand = Plus / Minus
Query: 798 gttccatttaaaagttatcaatagcagtgccttgacatttgggagctttgcccttgatat 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gttccatttaaaagttatcaatagcagtgccttgacatttgggagctttgcccttgatat 615
Query: 858 taccattattgctcagatggatatgggattttgcatgacaggaaaggatcttgtgagaaa 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 taccattattgctcagatggatatgggattttgcatgacaggaaaggatcttgtgagaaa 555
Query: 918 cctacgttcagctctatcatctctcatgtga 948
|||||||||||||||||||||||||||||||
Sbjct: 554 cctacgttcagctctatcatctctcatgtga 524
>gnl|LJGI|TC79026 similar to UniRef100_O81348 Cluster: Symbiotic ammonium
transporter; n=1; Glycine max|Rep: Symbiotic ammonium
transporter - Glycine max (Soybean), partial (37%)
Length = 804
Score = 214 bits (108), Expect = 8e-55
Identities = 219/256 (85%)
Strand = Plus / Plus
Query: 693 actgcctgaaattgaagcacgattctgtgaaagaaatgtcctcataaggctgcactgtct 752
||||||||||||||||||| |||| ||||| |||||||| |||||| | | ||||||
Sbjct: 148 actgcctgaaattgaagcaagattttgtgagagaaatgttctcatacgagttcactgtga 207
Query: 753 gaagaataaaggaattatagagaaaacaatcagtgagattgagaagttccatttaaaagt 812
||||| |||||| | |||| ||||||||| ||| |||||||| |||| |||||||
Sbjct: 208 gaagagcaaaggagtggtagaaaaaacaatccatgaaattgagaaactccacctaaaagt 267
Query: 813 tatcaatagcagtgccttgacatttgggagctttgcccttgatattaccattattgctca 872
|||||||||| ||| |||||||||||||||| |||||||||||| || |||||||||||
Sbjct: 268 catcaatagcactgctttgacatttgggagctgtgcccttgatataacaattattgctca 327
Query: 873 gatggatatgggattttgcatgacaggaaaggatcttgtgagaaacctacgttcagctct 932
||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct: 328 gatggatgtgggattttgcatgacagtcaaggatcttgtgagaaaactacgttcagcttt 387
Query: 933 atcatctctcatgtga 948
||||| ||||||||
Sbjct: 388 tacatctttcatgtga 403
>gnl|LJGI|TC71042 similar to UniRef100_O81348 Cluster: Symbiotic ammonium
transporter; n=1; Glycine max|Rep: Symbiotic ammonium
transporter - Glycine max (Soybean), partial (50%)
Length = 1031
Score = 212 bits (107), Expect = 3e-54
Identities = 362/445 (81%), Gaps = 4/445 (0%)
Strand = Plus / Plus
Query: 433 gctgaaaggaagcggcgagagaagctcagccagaggttcattgctctgtcagctcttgtt 492
|||||||| |||||||||||||||||||||||| |||||||||||| || || |||||
Sbjct: 469 gctgaaagaaagcggcgagagaagctcagccagcagttcattgctctatctgcccttgtc 528
Query: 493 ccgggcctgaaaaagatggacaaa-gcttctgttcttggagaagctatcaagtacttgaa 551
|| || || |||||||||||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 529 cctggactacaaaagatggacaaaagcttctgttcttggagatactatcaagtacctgaa 588
Query: 552 gcaaatgcaagaaaaggtgagtgctctagaggaggagcagaagcggaagaaaactgtgga 611
|||| |||| || || ||||| ||||| |||||||||||||| |||||||| |||| |
Sbjct: 589 gcaactgcaggagaaagtgagggctcttgaggaggagcagaacttgaagaaaaatgtgca 648
Query: 612 atctgtggtgattctgaagaaatct---ctatgtaatgatgctgaagacacttcttcaga 668
|||||||| ||| | ||||| ||| || | ||||||| |||| || |||| |||
Sbjct: 649 gtctgtggtaattgtaaagaagtctcaactttccaatgatgttgaaaactattctctaga 708
Query: 669 caatggtggtgaatttgatgacacactgcctgaaattgaagcacgattctgtgaaagaaa 728
||||||| ||||| | ||||||||||||||||||| |||| ||||| |||||
Sbjct: 709 atctggtggttcctttgacaaggaactgcctgaaattgaagcaagattttgtgagagaaa 768
Query: 729 tgtcctcataaggctgcactgtctgaagaataaaggaattatagagaaaacaatcagtga 788
||| |||||| | | |||||| ||||| |||||| | |||| ||||||||| |||
Sbjct: 769 tgttctcatacgagttcactgtgagaagagcaaaggagtggtagaaaaaacaatccatga 828
Query: 789 gattgagaagttccatttaaaagttatcaatagcagtgccttgacatttgggagctttgc 848
|||||||| |||| ||||||| |||||||||| ||| |||||||||||||||| |||
Sbjct: 829 aattgagaaactccacctaaaagtcatcaatagcactgctttgacatttgggagctgtgc 888
Query: 849 ccttgatattaccattattgctcag 873
||||||||| || ||||||||||||
Sbjct: 889 ccttgatataacaattattgctcag 913
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 109 gctgcttttggagaggctttgcaaaaacattcattcact 147
||||||||||||||| |||||||| | ||||||||||||
Sbjct: 178 gctgcttttggagagactttgcaacatcattcattcact 216
>gnl|LJGI|TC80043 similar to UniRef100_O81348 Cluster: Symbiotic ammonium transporter;
n=1; Glycine max|Rep: Symbiotic ammonium transporter -
Glycine max (Soybean), partial (50%)
Length = 1366
Score = 161 bits (81), Expect = 1e-38
Identities = 299/371 (80%), Gaps = 3/371 (0%)
Strand = Plus / Plus
Query: 506 agatggacaaagcttctgttcttggagaagctatcaagtacttgaagcaaatgcaagaaa 565
|||||||||||||||||||||||||||| ||||||||||| |||||||| |||| || |
Sbjct: 920 agatggacaaagcttctgttcttggagatactatcaagtacctgaagcaactgcaggaga 979
Query: 566 aggtgagtgctctagaggaggagcagaagcggaagaaaactgtggaatctgtggtgattc 625
| ||||| ||||| |||| ||||||||| |||||||| |||| | |||||||| |||
Sbjct: 980 aagtgagggctcttgagggggagcagaacttgaagaaaaatgtgcagtctgtggtaattg 1039
Query: 626 tgaagaaatctctatgt---aatgatgctgaagacacttcttcagacaatggtggtgaat 682
| ||||| |||| | | ||||||| |||| || |||| ||| ||||||| |
Sbjct: 1040 taaagaagtctcaactttccaatgatgttgaaaactattctctagaatctggtggttcct 1099
Query: 683 ttgatgacacactgcctgaaattgaagcacgattctgtgaaagaaatgtcctcataaggc 742
|||| | ||||||||||||||||||| |||| ||||| |||||||| |||||| |
Sbjct: 1100 ttgacaaggaactgcctgaaattgaagcaagattttgtgagagaaatgttctcatacgag 1159
Query: 743 tgcactgtctgaagaataaaggaattatagagaaaacaatcagtgagattgagaagttcc 802
| |||||| ||||| |||||| | |||| ||||||||| ||| |||||||| |||
Sbjct: 1160 ttcactgtgagaagagcaaaggagtggtagaaaaaacaatccatgaaattgagaaactcc 1219
Query: 803 atttaaaagttatcaatagcagtgccttgacatttgggagctttgcccttgatattacca 862
| ||||||| |||||||||| ||| |||||||||||||||| |||||||||||| || |
Sbjct: 1220 acctaaaagtcatcaatagcactgctttgacatttgggagctgtgcccttgatataacaa 1279
Query: 863 ttattgctcag 873
|||||||||||
Sbjct: 1280 ttattgctcag 1290
Score = 69.9 bits (35), Expect = 3e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 433 gctgaaaggaagcggcgagagaagctcagccagaggttcattgctct 479
|||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 560 gctgaaagaaagcggcgagagaagctcagccagcagttcattgctct 606
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 109 gctgcttttggagaggctttgcaaaaacattcattcact 147
||||||||||||||| |||||||| | ||||||||||||
Sbjct: 269 gctgcttttggagagactttgcaacatcattcattcact 307
>gnl|LJGI|TC67128 weakly similar to UniRef100_A7R3V3 Cluster: Chromosome chr7
scaffold_572, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_572, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (71%)
Length = 1601
Score = 77.8 bits (39), Expect = 1e-13
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 449 gagagaagctcagccagaggttcattgctctgtcagctcttgttccgggcctgaaaaaga 508
||||||||||||||||||| || |||||||| |||| ||| |||| || | || ||||
Sbjct: 648 gagagaagctcagccagagcttaattgctcttgcagcccttattcctggtttaaagaaga 707
Query: 509 tggacaaagcttctgttcttggagaagctatcaagtacttgaa 551
||||||| ||||| || |||||||| |||||||||||| ||||
Sbjct: 708 tggacaaggcttcagtccttggagacgctatcaagtacgtgaa 750
>gnl|LJGI|TC73883 similar to UniRef100_Q1PF17 Cluster: Basic helix-loop-helix family
protein; n=2; Arabidopsis thaliana|Rep: Basic
helix-loop-helix family protein - Arabidopsis thaliana
(Mouse-ear cress), partial (14%)
Length = 644
Score = 58.0 bits (29), Expect = 1e-07
Identities = 80/97 (82%)
Strand = Plus / Plus
Query: 428 taattgctgaaaggaagcggcgagagaagctcagccagaggttcattgctctgtcagctc 487
|||||||||| || ||| || |||| ||| | |||||| |||||||||||| ||||| |
Sbjct: 547 taattgctgagagaaagaggagagaaaagattagccagcagttcattgctctttcagccc 606
Query: 488 ttgttccgggcctgaaaaagatggacaaagcttctgt 524
|| |||| ||| | ||||||||||| || ||||||||
Sbjct: 607 ttattccaggcttcaaaaagatggataaggcttctgt 643