Miyakogusa Predicted Gene

Lj6g3v2168650.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2168650.1 CUFF.60735.1
         (1383 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS327412 similar to UniRef100_A7R224 Cluster: Chromosom...   333   2e-90
gnl|LJGI|FS353764 similar to UniRef100_A7R224 Cluster: Chromosom...   198   7e-50

>gnl|LJGI|FS327412 similar to UniRef100_A7R224 Cluster: Chromosome undetermined
           scaffold_394, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_394,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (26%)
          Length = 575

 Score =  333 bits (168), Expect = 2e-90
 Identities = 303/348 (87%)
 Strand = Plus / Plus

                                                                       
Query: 163 tcaggccctttggtgctggctggagtcctctgctgcatagcttcctctatatctagtgct 222
           |||||| || ||||||| || |||||| |||| | |||||||||||||||||||||||||
Sbjct: 221 tcaggctctatggtgcttgcgggagtcttctgtttcatagcttcctctatatctagtgct 280

                                                                       
Query: 223 ggtggaataggaggtggtgggctttttatacccatactaactattgtggcaggcttagac 282
           |||||||| || |||||||||||||||||||| |||||| |||||||||| ||| |||||
Sbjct: 281 ggtggaattggtggtggtgggctttttatacctatactagctattgtggctggcctagac 340

                                                                       
Query: 283 ctcaaaacagcttcaagtatctcagctttcatggtcacaggaggatcaattgcaaacgtt 342
           |||||||||||||||||  | || |||||||||||||||||||| ||| ||||||| |||
Sbjct: 341 ctcaaaacagcttcaagcttttctgctttcatggtcacaggagggtcacttgcaaatgtt 400

                                                                       
Query: 343 gcatgcaatatgtgctccacaagttcaaaatttggtgggaagtcattgattgactatgac 402
              |||||| ||||   ||||||||| |||||||||||    ||||||||||||||||||
Sbjct: 401 ctgtgcaatctgtgtaacacaagttctaaatttggtggaggttcattgattgactatgac 460

                                                                       
Query: 403 atagcacttttatcagaaccatgcatgttgttaggagtgagtattggagttatctgtaac 462
           ||||||||||||||||||||||| |||||| |||||||||||||||||||||| || |||
Sbjct: 461 atagcacttttatcagaaccatgtatgttgctaggagtgagtattggagttatatgcaac 520

                                                           
Query: 463 cttgtacttccagaatggttgatcacagtactttttgcttgttttctt 510
           |||||  | |||||||||||||| || || || ||||||  |||||||
Sbjct: 521 cttgtgttcccagaatggttgattactgttctgtttgctctttttctt 568



 Score = 63.9 bits (32), Expect = 2e-09
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 29  ttctcatctttattgcctttaatccttctaatgcaaaacaaacacaacccatttctgata 88
           |||||||||| ||  |||| || |||||||||||||||||| |||||||||||||  |||
Sbjct: 78  ttctcatcttcatcaccttcaacccttctaatgcaaaacaagcacaacccatttcaaata 137

               
Query: 89  tcct 92
           ||||
Sbjct: 138 tcct 141


>gnl|LJGI|FS353764 similar to UniRef100_A7R224 Cluster: Chromosome undetermined
            scaffold_394, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_394, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (31%)
          Length = 729

 Score =  198 bits (100), Expect = 7e-50
 Identities = 208/244 (85%)
 Strand = Plus / Minus

                                                                        
Query: 968  tttttccatcgatggcactactggctggggcattgggtggtgtattttggattgggggtg 1027
            ||||||||  ||||||| ||||||| |||  |||||||||| | ||| | ||||| || |
Sbjct: 600  tttttccagggatggcattactggcagggatattgggtggtatctttggtattggaggcg 541

                                                                        
Query: 1028 ggatgctggtaagtccaattcttcttcaggttggaatagctcctggggtaacagcagcta 1087
            | |||||| | |||||| |||||||||| |||||||||||||||  ||| |||||||| |
Sbjct: 540  gaatgctgattagtccacttcttcttcaagttggaatagctcctcaggtgacagcagcaa 481

                                                                        
Query: 1088 catgttccttcatggttttcttctcttctaccatgtcagcgttgcaatatctgttgttgg 1147
            ||||||| |||||||||||||| ||||| ||||||||||| || |||||||| |||||||
Sbjct: 480  catgttctttcatggttttcttttcttcaaccatgtcagccttccaatatctattgttgg 421

                                                                        
Query: 1148 gaatggaacatgtagagactgcactcatcttggccataatgtgttttgttgcatcacttc 1207
            | ||||||||  |||||| ||| |||||||||||| | || |||||||||||||||||| 
Sbjct: 420  gcatggaacacatagagattgccctcatcttggccttgatatgttttgttgcatcacttg 361

                
Query: 1208 ttgg 1211
            ||||
Sbjct: 360  ttgg 357