Miyakogusa Predicted Gene

Lj6g3v2156530.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2156530.1 tr|G6FXY1|G6FXY1_9CYAN Photosystem II oxygen
evolving complex protein PsbP (Precursor)
OS=Fischerell,36.03,0.0000000001,PsbP,Photosystem II PsbP, oxygen
evolving complex; no description,Mog1/PsbP, alpha/beta/alpha
sandwi,CUFF.60711.1
         (514 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67705 similar to UniRef100_A7PRN7 Cluster: Chromosome...   852   0.0  
gnl|LJGI|TC79933 weakly similar to UniRef100_Q9SA52 Cluster: Unc...   529   e-150

>gnl|LJGI|TC67705 similar to UniRef100_A7PRN7 Cluster: Chromosome chr14 scaffold_27,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_27, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (89%)
          Length = 1325

 Score =  852 bits (430), Expect = 0.0
 Identities = 430/430 (100%)
 Strand = Plus / Plus

                                                                       
Query: 41  agtctaaagcttttgcagttccaaggaggaaagcaatgtccttgatcttgtcaagttgta 100
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtctaaagcttttgcagttccaaggaggaaagcaatgtccttgatcttgtcaagttgta 440

                                                                       
Query: 101 ttctctcaaaggttggtttggcatttgctcaacagcctcctgtattccgcgagtacgtgg 160
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctctcaaaggttggtttggcatttgctcaacagcctcctgtattccgcgagtacgtgg 500

                                                                       
Query: 161 acacatttgatggttactcattcaagtaccctggaaattggatccaagtccgaggtgctg 220
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acacatttgatggttactcattcaagtaccctggaaattggatccaagtccgaggtgctg 560

                                                                       
Query: 221 gggctgacatatttttcagggacccttatatccttgatgaaaatctatcccttgaaatct 280
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggctgacatatttttcagggacccttatatccttgatgaaaatctatcccttgaaatct 620

                                                                       
Query: 281 cttcaccttcatcttcccaatacaagagcgttgaagacttgggtccaccccaagaagcag 340
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttcaccttcatcttcccaatacaagagcgttgaagacttgggtccaccccaagaagcag 680

                                                                       
Query: 341 gaaagaaagtgctcaagcagtatctgactgaatttatgtctacacgacttggcgttaggc 400
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaaagaaagtgctcaagcagtatctgactgaatttatgtctacacgacttggcgttaggc 740

                                                                       
Query: 401 gtgaagcaaatgttctttccacatcttccagagtagctgatgatggcaagttatactatc 460
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtgaagcaaatgttctttccacatcttccagagtagctgatgatggcaagttatactatc 800

                     
Query: 461 aagttgaggt 470
           ||||||||||
Sbjct: 801 aagttgaggt 810


>gnl|LJGI|TC79933 weakly similar to UniRef100_Q9SA52 Cluster: Uncharacterized protein
           At1g09340, chloroplast precursor; n=1; Arabidopsis
           thaliana|Rep: Uncharacterized protein At1g09340,
           chloroplast precursor - Arabidopsis thaliana (Mouse-ear
           cress), partial (24%)
          Length = 755

 Score =  529 bits (267), Expect = e-150
 Identities = 267/267 (100%)
 Strand = Plus / Plus

                                                                       
Query: 57  agttccaaggaggaaagcaatgtccttgatcttgtcaagttgtattctctcaaaggttgg 116
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 agttccaaggaggaaagcaatgtccttgatcttgtcaagttgtattctctcaaaggttgg 548

                                                                       
Query: 117 tttggcatttgctcaacagcctcctgtattccgcgagtacgtggacacatttgatggtta 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tttggcatttgctcaacagcctcctgtattccgcgagtacgtggacacatttgatggtta 608

                                                                       
Query: 177 ctcattcaagtaccctggaaattggatccaagtccgaggtgctggggctgacatattttt 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ctcattcaagtaccctggaaattggatccaagtccgaggtgctggggctgacatattttt 668

                                                                       
Query: 237 cagggacccttatatccttgatgaaaatctatcccttgaaatctcttcaccttcatcttc 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 cagggacccttatatccttgatgaaaatctatcccttgaaatctcttcaccttcatcttc 728

                                      
Query: 297 ccaatacaagagcgttgaagacttggg 323
           |||||||||||||||||||||||||||
Sbjct: 729 ccaatacaagagcgttgaagacttggg 755