Miyakogusa Predicted Gene
- Lj6g3v2132220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2132220.1 Non Chatacterized Hit- tr|I3SDL6|I3SDL6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.65,0,HLH,Helix-loop-helix domain; no
description,Helix-loop-helix domain; seg,NULL; HLH,
helix-loop-helix,CUFF.60690.1
(1335 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74777 similar to UniRef100_A1XJY6 Cluster: NADH-ubiqu... 955 0.0
gnl|LJGI|TC73084 66 6e-10
>gnl|LJGI|TC74777 similar to UniRef100_A1XJY6 Cluster: NADH-ubiquinone oxidoreductase
chain 5; n=1; Acorus gramineus|Rep: NADH-ubiquinone
oxidoreductase chain 5 - Acorus gramineus (Dwarf sweet
flag), partial (5%)
Length = 667
Score = 955 bits (482), Expect = 0.0
Identities = 515/522 (98%), Gaps = 3/522 (0%)
Strand = Plus / Plus
Query: 1 atggctgaggagtttcaagctgggatatgtggtgaaacatggtggaatatgaatccaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 atggctgaggagtttcaagctgggatatgtggtgaaacatggtggaatatgaatccaaca 208
Query: 61 agaagcgcgttccctctcatgagtccatcatcaacttgttctgttgcagctaatgatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 agaagcgcgttccctctcatgagtccatcatcaacttgttctgttgcagctaatgatgca 268
Query: 121 gggaactacagcacttggcaaacagactttcttgatttgagagcaacaaggccttgtgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gggaactacagcacttggcaaacagactttcttgatttgagagcaacaaggccttgtgtt 328
Query: 181 gctgaagaaactaacaataacaacatggtttctgatgtttctctgggtttcctagatgct 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 329 gctgaagaaactaacaataacaacatggtttctgatgtttctccgggtttcctagatgct 388
Query: 241 cagaagccacagcagagtgaatcagccaatggaactagtagcttcttgattgattccact 300
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 caaaagccacagcaaagtgaatcagccaatggaactagtagcttcttgattgattccact 448
Query: 301 ttacaaatcatggggtttggcctctcatctccaacttcatccaattggaataaccagtct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ttacaaatcatggggtttggcctctcatctccaacttcatccaattggaataaccagtct 508
Query: 361 ctctttcattgtagtggaaggccacagagcatggaagaaactggtttagattcttctggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ctctttcattgtagtggaaggccacagagcatggaagaaactggtttagattcttctggt 568
Query: 421 catcataatccacaagtttcctctgttgatgctaatttcaaggcaatgaaccaagatttt 480
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 569 catcataatccacaagtttcctccgttgatgctaatttcaaggc-atgaaccaagatttt 627
Query: 481 ggcttagatcagcagggtctgaattctgtaattaccagcagt 522
|||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 628 ggcttagatcagca-ggtctgaattctgt-attaccagcagt 667
>gnl|LJGI|TC73084
Length = 546
Score = 65.9 bits (33), Expect = 6e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1303 tttggaggcccacccatgggtatgggtaggtag 1335
|||||||||||||||||||||||||||||||||
Sbjct: 1 tttggaggcccacccatgggtatgggtaggtag 33