Miyakogusa Predicted Gene

Lj6g3v2130140.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2130140.1 tr|G7JSV8|G7JSV8_MEDTR Cysteine-rich
receptor-like protein kinase OS=Medicago truncatula
GN=MTR_4g09,39.39,4e-18,Protein kinase-like (PK-like),Protein
kinase-like domain; alpha-D-mannose-specific plant
lectins,Bul,CUFF.60685.1
         (2000 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65334 similar to UniRef100_A7P186 Cluster: Chromosome...    68   2e-10
gnl|LJGI|BW626679 weakly similar to UniRef100_A7QZK6 Cluster: Ch...    60   6e-08

>gnl|LJGI|TC65334 similar to UniRef100_A7P186 Cluster: Chromosome chr19 scaffold_4,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr19 scaffold_4, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (34%)
          Length = 1193

 Score = 67.9 bits (34), Expect = 2e-10
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1529 aaggtggttttggaccagtttacaagggtatattggaagatggacaggaagtagcagtta 1588
            ||||||| ||||||||||| |||||||| || |||  ||||||||| ||  |||| || |
Sbjct: 7    aaggtggctttggaccagtatacaagggaatgttgatagatggacaagagatagctgtga 66

                                                      
Query: 1589 aaagactttcaacaacatctagacaagggctagaagaattta 1630
            |||| ||||||| || ||||| ||||||| | ||||||||||
Sbjct: 67   aaaggctttcaaaaagatctacacaagggttggaagaattta 108


>gnl|LJGI|BW626679 weakly similar to UniRef100_A7QZK6 Cluster: Chromosome undetermined
           scaffold_278, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_278,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (7%)
          Length = 487

 Score = 60.0 bits (30), Expect = 6e-08
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 233 tagctaatagaaaccaaccactgaatgattcttctggg 270
           ||||||||||| ||||||||||||| ||||||||||||
Sbjct: 323 tagctaatagagaccaaccactgaaagattcttctggg 360