Miyakogusa Predicted Gene
- Lj6g3v2130020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2130020.1 tr|Q19MB6|Q19MB6_ARALY S receptor kinase SRK16
(Fragment) OS=Arabidopsis lyrata PE=3 SV=1,50.62,0.000000001,no
description,Bulb-type lectin domain; no description,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NA,gene.g67452.t1.1
(2151 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP065848 weakly similar to UniRef100_Q40096 Cluster: Re... 319 4e-86
gnl|LJGI|DC593057 similar to UniRef100_O23743 Cluster: SFR1 prot... 206 4e-52
gnl|LJGI|DC593431 similar to UniRef100_A7P186 Cluster: Chromosom... 174 1e-42
gnl|LJGI|BP063461 weakly similar to UniRef100_A7QZL1 Cluster: Ch... 133 5e-30
>gnl|LJGI|BP065848 weakly similar to UniRef100_Q40096 Cluster: Receptor protein kinase;
n=1; Ipomoea trifida|Rep: Receptor protein kinase -
Ipomoea trifida (Morning glory), partial (14%)
Length = 497
Score = 319 bits (161), Expect = 4e-86
Identities = 298/344 (86%)
Strand = Plus / Minus
Query: 1808 actcaagcgaggatacgaatcttttagagcatgcttggaggttgtggagagaaggcaatg 1867
|||||| ||| |||| ||||||||||| | |||||||||| |||| ||||||||| ||
Sbjct: 485 actcaaacgaagataagaatcttttagggaatgcttggagncagtggggagaaggcagtg 426
Query: 1868 cattgagacttattgatcaatcaattaatgattcaaattcgatatctgaagttctgagat 1927
|||| ||||||||||| ||||||| |||||| |||| | || |||||||| ||||
Sbjct: 425 cattagaacttattgatccctcaattagcgattcatattcaacctcagaagttcttagat 366
Query: 1928 gcatacatattggactcttgtgtgtccaagaatgtgcacaggatagacctacaatgtcct 1987
|||| ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||| |
Sbjct: 365 gcattcatattggactcttgtgtgtccaagaacgtgcagaggataggcctacaatgtctt 306
Query: 1988 cagtgattttgatgttgaacagcgaagttgcaataatgcctcaaccaaggaaccctgggt 2047
||||||| |||||||||||||| |||| | | |||| || ||||| || ||||||||||
Sbjct: 305 cagtgatcttgatgttgaacagtgaagctcctctaataccacaacccagaaaccctgggt 246
Query: 2048 tttccctaggaaagagtcctccagaaactgattcttctttaagtaagcaagatgaatcat 2107
||||||||||||||| ||||||||| ||||||||||||| |||||||||||| ||| |||
Sbjct: 245 tttccctaggaaagaatcctccagagactgattcttcttcaagtaagcaagaggaaccat 186
Query: 2108 ggagtgtgaaccaagtcacagtcacattgccggatgcaagataa 2151
|||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 185 ggagtgtgaaccaagtcacaatcacattgctagatgcaagataa 142
>gnl|LJGI|DC593057 similar to UniRef100_O23743 Cluster: SFR1 protein precursor; n=1;
Brassica oleracea|Rep: SFR1 protein precursor - Brassica
oleracea (Wild cabbage), partial (5%)
Length = 579
Score = 206 bits (104), Expect = 4e-52
Identities = 295/358 (82%), Gaps = 18/358 (5%)
Strand = Plus / Plus
Query: 71 cagataccttaaccgcaacacaaactctcacaaccaaccagaccctccaatcatccaatg 130
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
Sbjct: 180 cagataccttaaccgcaacacaaactctcgcaaccaaccagaccctccaatcatctaacg 239
Query: 131 gtgttttcattctcggattcttctctgggagaacaaatccaaattattactaccttggca 190
||||||||| || ||||||||| | | || || ||||| | || |||||||| ||||
Sbjct: 240 ctgttttcatccttggattcttccccagcagcaccaatcccacttcgtactacctgggca 299
Query: 191 tatggtacaaaaacttgggtgacagaacagtggtttgggtggcaaacagagacaacccac 250
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 300 tatggtacaaggacttgggtgatagaacagtggtttgggtggcaaacagagacaacccag 359
Query: 251 tt------gaaaactccacaggatt------tctcaaaatcaatgtaacaaatggaaact 298
|| | |||||||||||||| |||||| ||||| | ||||||||||
Sbjct: 360 ttattgacaacaactccacaggattaatatctctcaagatcaactcagaaaatggaaaca 419
Query: 299 tggttcttgtaagctcatct---ggtatccctgtatggtctt---caattcaaaccacag 352
| | |||||| | ||||||| || | |||||||||||| | | | |||||||| ||
Sbjct: 420 tagctcttgttaactcatctgcagggaaccctgtatggtcctccaccaatcaaaccaaag 479
Query: 353 ctagcaacccagttcttcagcttctggatactggcaatctagttctcagagaagaagc 410
||||||||||||||||||||||| |||| ||||||||| ||||| | |||||||||||
Sbjct: 480 ctagcaacccagttcttcagcttttggacactggcaatttagttattagagaagaagc 537
>gnl|LJGI|DC593431 similar to UniRef100_A7P186 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 589
Score = 174 bits (88), Expect = 1e-42
Identities = 259/314 (82%), Gaps = 9/314 (2%)
Strand = Plus / Plus
Query: 181 taccttggcatatggtacaaaaacttgggtgacagaacagtggtttgggtggcaaacaga 240
|||||||| ||||||||||| ||||||| | ||||||||||||||||| |||||||||
Sbjct: 208 taccttggtatatggtacaagaacttggat---agaacagtggtttgggttgcaaacaga 264
Query: 241 gacaacccacttgaaaactccacaggatttctcaaaatcaatgtaacaaatggaaacttg 300
|| || | |||| ||||||||||||| |||||| || || | | |||||| ||
Sbjct: 265 gataaagccgttgacaactccacaggatatctcaagattgttgcagacgacggaaacatg 324
Query: 301 gttcttgtaagctcatctggtatccctgtatggtcttcaattcaaaccacagctagcaac 360
|||||||| | ||||||||| | |||||||||||| || | |||||||||||| ||||||
Sbjct: 325 gttcttgtcaactcatctgggaaccctgtatggtcctccaatcaaaccacagccagcaac 384
Query: 361 ccagttcttcagcttctggatactggcaatctagttctcagagaagaagcaaacatgaac 420
|||||| ||||||||||||||||||| ||| ||||| |||| |||||||||||||||
Sbjct: 385 ccagttgttcagcttctggatactgggaatttagttgtcag---agaagcaaacatgaat 441
Query: 421 aattcccctgcatattttctatggcagagcttcgattacccaacagacacgttgttacca 480
| ||| | | | ||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 442 gactcc---ataaagtatctgtggcagagcttcgattatccgacagacacgttgttacca 498
Query: 481 gacatgaaaatggg 494
|||||||| |||||
Sbjct: 499 gacatgaagatggg 512
>gnl|LJGI|BP063461 weakly similar to UniRef100_A7QZL1 Cluster: Chromosome undetermined
scaffold_278, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_278, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(9%)
Length = 450
Score = 133 bits (67), Expect = 5e-30
Identities = 109/123 (88%)
Strand = Plus / Minus
Query: 2029 caaccaaggaaccctgggttttccctaggaaagagtcctccagaaactgattcttcttta 2088
||||| || ||||||||||||| ||||||||||| ||||||| | ||||||||||||| |
Sbjct: 415 caacctagaaaccctgggttttgcctaggaaagaatcctccaaagactgattcttcttca 356
Query: 2089 agtaagcaagatgaatcatggagtgtgaaccaagtcacagtcacattgccggatgcaaga 2148
||||| ||||||||| | ||||||||||||||||| ||||||||||| | |||||||||
Sbjct: 355 agtaatcaagatgaaacctggagtgtgaaccaagttacagtcacattactagatgcaaga 296
Query: 2149 taa 2151
|||
Sbjct: 295 taa 293