Miyakogusa Predicted Gene
- Lj6g3v2128980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2128980.1 tr|B9HYQ3|B9HYQ3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_771207 PE=4
SV=1,55.5,0,PROTEIN_KINASE_ST,Serine/threonine-protein kinase, active
site; SUBFAMILY NOT NAMED,NULL; FAMILY NOT,CUFF.60712.1
(2439 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81892 weakly similar to UniRef100_A7R582 Cluster: Chr... 1059 0.0
gnl|LJGI|TC65172 similar to UniRef100_A7R0A9 Cluster: Chromosome... 70 7e-11
gnl|LJGI|TC74618 similar to UniRef100_A7R4W5 Cluster: Chromosome... 68 3e-10
gnl|LJGI|FS361056 similar to UniRef100_A7QNR1 Cluster: Chromosom... 62 2e-08
gnl|LJGI|FS356235 similar to UniRef100_A7QNR1 Cluster: Chromosom... 62 2e-08
gnl|LJGI|FS355518 similar to UniRef100_A7QC50 Cluster: Chromosom... 60 7e-08
gnl|LJGI|TC60125 similar to UniRef100_A7PXP7 Cluster: Chromosome... 58 3e-07
gnl|LJGI|TC73971 similar to UniRef100_A7QZK6 Cluster: Chromosome... 54 4e-06
>gnl|LJGI|TC81892 weakly similar to UniRef100_A7R582 Cluster: Chromosome undetermined
scaffold_907, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_907,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (29%)
Length = 632
Score = 1059 bits (534), Expect = 0.0
Identities = 588/606 (97%)
Strand = Plus / Plus
Query: 1 atggccttcatcaattacataagtttgttctcaactttgattatattttgtttccaatgc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 27 atggccttcatcaattacataagtttgttctcaactttgattatattttgtttccaatac 86
Query: 61 ctatattttagcactgccatagacaccatcaattcctctcatttcataaaggaccctgaa 120
||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 87 ctaaattttagcactgccatagacaccatcaattcctctcactacataaaggaccctgaa 146
Query: 121 actataacctccaatgatggtgctttcaccttaggattttacagccctgaaaattctgct 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 147 actataacctccaatgatggtgctttcaccttaggatttttcagccctgaaaattctgct 206
Query: 181 aatcgctatgtaggaatttggtacatgtccaaatccacagtgatatgggtagctaacaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 aatcgctatgtaggaatttggtacatgtccaaatccacagtgatatgggtagctaacaga 266
Query: 241 gaccaaccactcaaggactcttctgggagtttcacaatatccaatgatggaaaccttgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gaccaaccactcaaggactcttctgggagtttcacaatatccaatgatggaaaccttgtg 326
Query: 301 gttttgaatggacaaaaacatgtgatgtggtcttccaatgtatcaagcatttctaccaac 360
||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 327 gttttgaatggacaaaaacatgtgatgatgtcttccaatgtatcaaacatttctaccaac 386
Query: 361 tcaagttccaaactttcagattctgggaaacttgatctcctggacagtaaaggaaacaag 420
|||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||
Sbjct: 387 tcaagttccaaactttcagattttgggaaacttgatctcctggacagtacaggaaataag 446
Query: 421 gtgtgggagagttttcagcatcctacagacactttgatgccaaacatgagactgagcaac 480
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gcgtgggagagttttcagcatcctacagacactttgatgccaaacatgagactgagcaac 506
Query: 481 aatgaaagaacaggtgagaaagttgaaatcacagcatggaaaagcccttcagatccatcc 540
||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||
Sbjct: 507 aatgaaagaacaggtgagaaagttggaatcacagcatggaaaaacccttctgatccatcc 566
Query: 541 cgcgggaacttcactacaaccattgaacgagaaacttttccagaaattttcattaggaat 600
|||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||
Sbjct: 567 cgcgggaacttcactacaaccattgaacgagaaactattccagaagttttcatttggaat 626
Query: 601 gaagaa 606
||||||
Sbjct: 627 gaagaa 632
>gnl|LJGI|TC65172 similar to UniRef100_A7R0A9 Cluster: Chromosome undetermined
scaffold_302, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_302, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(12%)
Length = 718
Score = 69.9 bits (35), Expect = 7e-11
Identities = 77/91 (84%)
Strand = Plus / Plus
Query: 1975 acatatggttatatgtccccagaatacgcaatgcaaggattgttttcagagaaatcagat 2034
||||||||||||||||| || ||||| |||||||| ||| |||||||| || ||||||
Sbjct: 51 acatatggttatatgtctccggaatatgcaatgcatggacaattttcagaaaagtcagat 110
Query: 2035 gtctttagttttggagttttgcttttggaga 2065
|| ||||||||||| ||| | |||||||||
Sbjct: 111 gtgtttagttttggtgttatagttttggaga 141
>gnl|LJGI|TC74618 similar to UniRef100_A7R4W5 Cluster: Chromosome undetermined
scaffold_798, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_798, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(56%)
Length = 1079
Score = 67.9 bits (34), Expect = 3e-10
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 1967 ttgttggcacatatggttatatgtccccagaatacgcaatgcaaggattgttttcagaga 2026
||||||| || ||||| |||||| | ||||| || |||||||| ||| ||||||| ||
Sbjct: 230 ttgttggaacctatggatatatggcaccagagtatgcaatgcatggacatttttcagtga 289
Query: 2027 aatcagatgtctttagttttggagtt 2052
||||||||||||| ||||||||||||
Sbjct: 290 aatcagatgtcttcagttttggagtt 315
>gnl|LJGI|FS361056 similar to UniRef100_A7QNR1 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(33%)
Length = 605
Score = 61.9 bits (31), Expect = 2e-08
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 1966 gttgttggcacatatggttatatgtccccagaatacgcaatgcaaggattgttttcagag 2025
||||| |||||||||||||||||||| || ||||| |||||||| ||| ||||| | |
Sbjct: 202 gttgtgggcacatatggttatatgtctcccgaatatgcaatgcacggaagattttcggtg 143
Query: 2026 aaatcagatgtctttagttttggagtt 2052
|| || ||||| || ||||||||||||
Sbjct: 142 aagtctgatgttttcagttttggagtt 116
>gnl|LJGI|FS356235 similar to UniRef100_A7QNR1 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(31%)
Length = 661
Score = 61.9 bits (31), Expect = 2e-08
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 1966 gttgttggcacatatggttatatgtccccagaatacgcaatgcaaggattgttttcagag 2025
||||| |||||||||||||||||||| || ||||| |||||||| ||| ||||| | |
Sbjct: 211 gttgtgggcacatatggttatatgtctcccgaatatgcaatgcacggaagattttcggtg 152
Query: 2026 aaatcagatgtctttagttttggagtt 2052
|| || ||||| || ||||||||||||
Sbjct: 151 aagtctgatgttttcagttttggagtt 125
>gnl|LJGI|FS355518 similar to UniRef100_A7QC50 Cluster: Chromosome chr10 scaffold_76,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_76, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 711
Score = 60.0 bits (30), Expect = 7e-08
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 1967 ttgttggcacatatggttatatgtccccagaatacgcaatgcaaggattgttttcagaga 2026
||||||| |||||||| |||||||| |||||||| |||||||| ||| || || | ||
Sbjct: 518 ttgttgggacatatggctatatgtctccagaatatgcaatgcatggacaattctctgtga 459
Query: 2027 aatcagatgtctttagttttgg 2048
|||| ||||| |||||||||||
Sbjct: 458 aatctgatgtgtttagttttgg 437
>gnl|LJGI|TC60125 similar to UniRef100_A7PXP7 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 1519
Score = 58.0 bits (29), Expect = 3e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1897 ccaaaaatatcagactttggtttggccagaatatttggagg 1937
|||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 760 ccaaaaatttcagactttggattggcgagaatatttggagg 800
>gnl|LJGI|TC73971 similar to UniRef100_A7QZK6 Cluster: Chromosome undetermined
scaffold_278, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_278, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(8%)
Length = 575
Score = 54.0 bits (27), Expect = 4e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 2116 agccttttaggatttgcatggaagctatgga 2146
||||||||||||||||||||||| |||||||
Sbjct: 22 agccttttaggatttgcatggaaactatgga 52