Miyakogusa Predicted Gene
- Lj6g3v2118950.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2118950.2 Non Chatacterized Hit- tr|I1ME83|I1ME83_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55662
PE,85.78,0,SUBFAMILY NOT NAMED,NULL; UBIQUITIN THIOLESTERASE PROTEIN
OTUB,NULL; Peptidase_C65,Peptidase C65, ot,CUFF.60681.2
(651 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79649 similar to UniRef100_A7YFC1 Cluster: Otubain-li... 1229 0.0
gnl|LJGI|BW600101 similar to UniRef100_Q8LG98 Cluster: Ubiquitin... 492 e-138
>gnl|LJGI|TC79649 similar to UniRef100_A7YFC1 Cluster: Otubain-like cysteine
protease; n=1; Populus trichocarpa|Rep: Otubain-like
cysteine protease - Populus trichocarpa (Western balsam
poplar) (Populus balsamiferasubsp. trichocarpa), partial
(85%)
Length = 1168
Score = 1229 bits (620), Expect = 0.0
Identities = 643/652 (98%), Gaps = 1/652 (0%)
Strand = Plus / Plus
Query: 1 atgcagaataaagaagcagtctctgaagatggtgaaatagggtctgagtggaacaatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atgcagaataaagaagcagtctctgaagatggtgaaatagggtctgagtggaacaatttt 172
Query: 61 ggagacgatgatataatgcagcagcaacattcaattcaagctgatcaagccaacaaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ggagacgatgatataatgcagcagcaacattcaattcaagctgatcaagccaacaaagtt 232
Query: 121 ccatttgttggtgacaaggagcc-gttatctagcttggctgctgaatatcaatcaggcag 179
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 233 ccatttgttggtgacaaggagcccgttatctagcttggctgctgaatatcaatcaggcag 292
Query: 180 tgctattttgctcgagaaaatcaaggtgcttgatcagcaatatgctgccattcggcgaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tgctattttgctcgagaaaatcaaggtgcttgatcagcaatatgctgccattcggcgaac 352
Query: 240 tcgcggagatggaaactgcttctttcgcggcttcatgttttcgtaccttgagcatgttct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tcgcggagatggaaactgcttctttcgcggcttcatgttttcgtaccttgagcatgttct 412
Query: 300 ggtatctcaagaccaagctgaaattgatcgtatccaagccaatgttgaaaaaagtagaac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ggtatctcaagaccaagctgaaattgatcgtatccaagccaatgttgaaaaaagtagaac 472
Query: 360 agcactgcagaccttgggttacacagagttaacttttgaagannnnnnnncgttattcat 419
|||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 473 agcactgcagaccttgggttacacagagttaacttttgaagattttttttcgttattcat 532
Query: 420 tgagcagctggaaagtgttattcaagggaaagagacttccataagtcatgaagagcttgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tgagcagctggaaagtgttattcaagggaaagagacttccataagtcatgaagagcttgt 592
Query: 480 tcttagaagccgagatcagtcaatatctgattatgttgttatgttcttcagatttgttac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tcttagaagccgagatcagtcaatatctgattatgttgttatgttcttcagatttgttac 652
Query: 540 ctctgctgaaatacagaagcgctcagaattttttgaacctttcatactgggcttaactaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ctctgctgaaatacagaagcgctcagaattttttgaacctttcatactgggcttaactaa 712
Query: 600 cacgacagttgagcagttttgcaaatcatctgttgaaccaatgggtgaagag 651
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 cacgacagttgagcagttttgcaaatcatctgttgaaccaatgggtgaagag 764
>gnl|LJGI|BW600101 similar to UniRef100_Q8LG98 Cluster: Ubiquitin thioesterase
otubain-like; n=1; Arabidopsis thaliana|Rep: Ubiquitin
thioesterase otubain-like - Arabidopsis thaliana
(Mouse-ear cress), partial (26%)
Length = 475
Score = 492 bits (248), Expect = e-138
Identities = 284/296 (95%)
Strand = Plus / Plus
Query: 51 gaacaattttggagacgatgatataatgcagcagcaacattcaattcaagctgatcaagc 110
||||||||| |||||| |||||| ||||| || | || |||||||||| ||||||||||
Sbjct: 180 gaacaatttaggagacaatgataaaatgccacatccactttcaattcaaactgatcaagc 239
Query: 111 caacaaagttccatttgttggtgacaaggagccgttatctagcttggctgctgaatatca 170
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 240 caacaaagttccatttgttggtgacaaggagccgttatctatcttggctgctgaatatca 299
Query: 171 atcaggcagtgctattttgctcgagaaaatcaaggtgcttgatcagcaatatgctgccat 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atcaggcagtgctattttgctcgagaaaatcaaggtgcttgatcagcaatatgctgccat 359
Query: 231 tcggcgaactcgcggagatggaaactgcttctttcgcggcttcatgttttcgtaccttga 290
|| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 360 tctgcgaactcgcggagatggaaactgcttctttcgcggcttcatgttttcataccttga 419
Query: 291 gcatgttctggtatctcaagaccaagctgaaattgatcgtatccaagccaatgttg 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gcatgttctggtatctcaagaccaagctgaaattgatcgtatccaagccaatgttg 475