Miyakogusa Predicted Gene

Lj6g3v2116830.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2116830.1 tr|G7LHQ3|G7LHQ3_MEDTR Ubiquitin
carboxyl-terminal hydrolase OS=Medicago truncatula GN=MTR_8g067060
,55.84,0,UCH_2_1,Peptidase C19, ubiquitin carboxyl-terminal hydrolase
2, conserved site; UCH_2_2,Peptidase C1,CUFF.60668.1
         (1206 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69611 similar to UniRef100_A7PC87 Cluster: Ubiquitin ...   256   3e-67

>gnl|LJGI|TC69611 similar to UniRef100_A7PC87 Cluster: Ubiquitin carboxyl-terminal
            hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin
            carboxyl-terminal hydrolase - Vitis vinifera (Grape),
            partial (5%)
          Length = 524

 Score =  256 bits (129), Expect = 3e-67
 Identities = 162/173 (93%)
 Strand = Plus / Plus

                                                                        
Query: 1031 ccagagtatctggagatgaagtcttgtgtcaacaagcatacatcctgttttatgcacgac 1090
            |||| ||||| |||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 1    ccagtgtatccggagatgaagtcttgtctcaagaagcatacatcctgttttatgcacgac 60

                                                                        
Query: 1091 gcggaacaccatggttttcgagtattatagaggatgtaaactcatcatatccacactcag 1150
              |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 61   aaggaacaccatggttttcgagtattatggaggatgtaaactcatcatatcaacactcag 120

                                                                 
Query: 1151 gttcaggcaacaaaggtgattgtggtggtgatgaacaaattgaagatcaacac 1203
            ||||||||||||||||||||||||||||| |||||||||| |||| |||||||
Sbjct: 121  gttcaggcaacaaaggtgattgtggtggtaatgaacaaatggaaggtcaacac 173