Miyakogusa Predicted Gene

Lj6g3v2115770.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2115770.1 Non Chatacterized Hit- tr|A5C057|A5C057_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,55.22,0.000000000000007,JMJC,JmjC domain; TRANSCRIPTION FACTOR
JUMONJI (JMJC) DOMAIN-CONTAINING PROTEIN,NULL; JMJC
DOMAIN-CO,gene.g67432.t1.1
         (2052 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73824 similar to UniRef100_A2Q2B0 Cluster: Jumonji do...   498   e-140
gnl|LJGI|BP063052 similar to UniRef100_A2Q2B0 Cluster: Jumonji d...   196   4e-49
gnl|LJGI|TC64175 similar to UniRef100_A7QWE7 Cluster: Chromosome...    54   4e-06

>gnl|LJGI|TC73824 similar to UniRef100_A2Q2B0 Cluster: Jumonji domain-containing
            protein 1A , related; n=1; Medicago truncatula|Rep:
            Jumonji domain-containing protein 1A , related - Medicago
            truncatula (Barrel medic), complete
          Length = 588

 Score =  498 bits (251), Expect = e-140
 Identities = 298/319 (93%), Gaps = 21/319 (6%)
 Strand = Plus / Plus

                                                                        
Query: 1734 gagacttaaggaggagtttgaaattgaaccatggacttttgagcaacatgctggagaagc 1793
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gagacttaaggaggagtttgaaattgaaccatggacttttgagcaacatgctggagaagc 60

                                                                        
Query: 1794 tgtcatcattccagctggatgcccataccagatgaggaatcctaagtatctgattcttga 1853
            ||||||||||||||||||||||||||||||||||||||||||||||              
Sbjct: 61   tgtcatcattccagctggatgcccataccagatgaggaatcctaag-------------- 106

                                                                        
Query: 1854 tctgcagagctgtgttcatgtggtattggaatttgtgtcccctgagaatgttactgagtc 1913
                   |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107  -------agctgtgttcatgtggtattggaatttgtgtcccctgagaatgttactgagtc 159

                                                                        
Query: 1914 tatccaattgattgatgaggtccgtcttcttccaaaagaccacaaagcaaaagtagacaa 1973
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160  tatccaattgattgatgaggtccgtcttcttccaaaagaccacaaagcaaaagtagacaa 219

                                                                        
Query: 1974 gctggagatgaagaaaatggccctccacagcatgagcacagcaatagaagaaattcgtga 2033
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220  gctggagatgaagaaaatggccctccacagcatgagcacagcaatagaagaaattcgtga 279

                               
Query: 2034 gcttacttgcaaaacatga 2052
            |||||||||||||||||||
Sbjct: 280  gcttacttgcaaaacatga 298


>gnl|LJGI|BP063052 similar to UniRef100_A2Q2B0 Cluster: Jumonji domain-containing
            protein 1A , related; n=1; Medicago truncatula|Rep:
            Jumonji domain-containing protein 1A , related - Medicago
            truncatula (Barrel medic), complete
          Length = 485

 Score =  196 bits (99), Expect = 4e-49
 Identities = 236/287 (82%), Gaps = 21/287 (7%)
 Strand = Plus / Minus

                                                                        
Query: 1732 atgagacttaaggaggagtttgaaattgaaccatggacttttgagcaacatgctggagaa 1791
            ||||||||||||||||||||  | || ||||||||||||||| ||||||||| |||||||
Sbjct: 485  atgagacttaaggaggagttcaagatcgaaccatggacttttcagcaacatgttggagaa 426

                                                                        
Query: 1792 gctgtcatcattccagctggatgcccataccagatgaggaatcctaagtatctgattctt 1851
            |||||||||||||| ||||| || ||||||||||| ||||||||||||            
Sbjct: 425  gctgtcatcattcctgctggttgtccataccagatcaggaatcctaag------------ 378

                                                                        
Query: 1852 gatctgcagagctgtgttcatgtggtattggaatttgtgtcccctgagaatgttactgag 1911
                     || ||||||||||||||| ||||||||||||||||||| ||| |||| |||
Sbjct: 377  ---------agttgtgttcatgtggtaatggaatttgtgtcccctgaaaatattaccgag 327

                                                                        
Query: 1912 tctatccaattgattgatgaggtccgtcttcttccaaaagaccacaaagcaaaagtagac 1971
            | |||||| ||||||||||||||||| ||  | ||  ||||||| ||| |||||||||||
Sbjct: 326  tgtatccagttgattgatgaggtccggctgttacctgaagaccataaatcaaaagtagac 267

                                                           
Query: 1972 aagctggagatgaagaaaatggccctccacagcatgagcacagcaat 2018
            ||||||||| |||||||||||||||| || ||||||||  |||||||
Sbjct: 266  aagctggaggtgaagaaaatggcccttcagagcatgagttcagcaat 220


>gnl|LJGI|TC64175 similar to UniRef100_A7QWE7 Cluster: Chromosome undetermined
            scaffold_203, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_203, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (20%)
          Length = 754

 Score = 54.0 bits (27), Expect = 4e-06
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1756 attgaaccatggacttttgagcaacatgctggagaagctgtcatcattccagctggatg 1814
            ||||||||||||||||||||||||||   ||| || |||||  |||||||||| |||||
Sbjct: 303  attgaaccatggacttttgagcaacaccttggtgaggctgttttcattccagcaggatg 361