Miyakogusa Predicted Gene
- Lj6g3v2085690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2085690.1 tr|B9H210|B9H210_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_555484 PE=4
SV=1,56.99,8e-19,seg,NULL; DUF3774,Protein of unknown function
wound-induced,CUFF.60657.1
(273 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62716 similar to UniRef100_A7Q388 Cluster: Chromosome... 500 e-141
gnl|LJGI|TC75183 similar to UniRef100_A7Q391 Cluster: Chromosome... 50 7e-06
gnl|LJGI|TC70268 similar to UniRef100_A7Q391 Cluster: Chromosome... 50 7e-06
gnl|LJGI|TC66534 similar to UniRef100_A7Q391 Cluster: Chromosome... 50 7e-06
>gnl|LJGI|TC62716 similar to UniRef100_A7Q388 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 803
Score = 500 bits (252), Expect = e-141
Identities = 266/273 (97%)
Strand = Plus / Plus
Query: 1 atgagtttaaggtacatgagcagggtgttttaccaaactggggtgaaaatgctgaaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atgagtttaaggtacatgagcagggtgttttaccaaactggggtgaaaatgctgaaagat 230
Query: 61 acaggctcaaaatgtggtgactcaaccatgaagtctctcaaggactctgctgcagcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 acaggctcaaaatgtggtgactcaaccatgaagtctctcaaggactctgctgcagcttcc 290
Query: 121 tccgcctcctcctcttcctcatcaaagcagacatggcgtttcttatcnnnnnnngattca 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 291 tccgcctcctcctcttcctcatcaaagcagacatggcgtttcttatctttttttgattca 350
Query: 181 cctgccttcaaagctcccaacactgacaaggccaaacaggctgaagagtctctccgcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 cctgccttcaaagctcccaacactgacaaggccaaacaggctgaagagtctctccgcctt 410
Query: 241 atcatgttcttgagctgctggggtcccaactga 273
|||||||||||||||||||||||||||||||||
Sbjct: 411 atcatgttcttgagctgctggggtcccaactga 443
>gnl|LJGI|TC75183 similar to UniRef100_A7Q391 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (90%)
Length = 535
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 242 tcatgttcttgagctgctggggtcccaac 270
|||||| ||||||||||||||||||||||
Sbjct: 325 tcatgtacttgagctgctggggtcccaac 353
>gnl|LJGI|TC70268 similar to UniRef100_A7Q391 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (90%)
Length = 507
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 242 tcatgttcttgagctgctggggtcccaac 270
|||||| ||||||||||||||||||||||
Sbjct: 346 tcatgtacttgagctgctggggtcccaac 374
>gnl|LJGI|TC66534 similar to UniRef100_A7Q391 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (83%)
Length = 705
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 242 tcatgttcttgagctgctggggtcccaac 270
|||||| ||||||||||||||||||||||
Sbjct: 365 tcatgtacttgagctgctggggtcccaac 393