Miyakogusa Predicted Gene

Lj6g3v2082590.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2082590.1 Non Chatacterized Hit- tr|E0CVX6|E0CVX6_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,33.83,3e-18,
,CUFF.60653.1
         (915 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV407602 similar to UniRef100_A7QYI0 Cluster: Chromosom...   347   8e-95
gnl|LJGI|AV769020                                                     198   4e-50

>gnl|LJGI|AV407602 similar to UniRef100_A7QYI0 Cluster: Chromosome undetermined
           scaffold_247, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_247,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (25%)
          Length = 418

 Score =  347 bits (175), Expect = 8e-95
 Identities = 175/175 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatagctaattatgttctacctaaaagcaaggatatgcctcattcagatgagtttttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atgatagctaattatgttctacctaaaagcaaggatatgcctcattcagatgagtttttt 303

                                                                       
Query: 61  gatcaggttatgttcgtagaactgaaccgaggcgagtctcaaaaatatttggatcagatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gatcaggttatgttcgtagaactgaaccgaggcgagtctcaaaaatatttggatcagatg 363

                                                                  
Query: 121 aagcaggatctttcatctccatctaacaatgacccatctacattatctcgtggag 175
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aagcaggatctttcatctccatctaacaatgacccatctacattatctcgtggag 418


>gnl|LJGI|AV769020 
          Length = 373

 Score =  198 bits (100), Expect = 4e-50
 Identities = 100/100 (100%)
 Strand = Plus / Minus

                                                                       
Query: 816 gtatgggccaccggctccaagacctacatatgaaggggtacctgattctttgcggtatcc 875
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtatgggccaccggctccaagacctacatatgaaggggtacctgattctttgcggtatcc 314

                                                   
Query: 876 agggaggtatgcccctcagcgtccaagatactcctgaatg 915
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agggaggtatgcccctcagcgtccaagatactcctgaatg 274