Miyakogusa Predicted Gene

Lj6g3v2080320.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2080320.1 tr|Q7G282|Q7G282_ORYSJ Expressed protein OS=Oryza
sativa subsp. japonica GN=LOC_Os10g36480 PE=2
SV=1,35.56,1e-17,seg,NULL; DUF1352,Protein of unknown function
DUF1352,CUFF.60637.1
         (543 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62818 similar to UniRef100_A7Q4X9 Cluster: Chromosome...  1076   0.0  

>gnl|LJGI|TC62818 similar to UniRef100_A7Q4X9 Cluster: Chromosome undetermined
           scaffold_51, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_51, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (34%)
          Length = 973

 Score = 1076 bits (543), Expect = 0.0
 Identities = 543/543 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcagcacagaaattcatcgttaggaaggccttctggaaccgatggctctgattactcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atgcagcacagaaattcatcgttaggaaggccttctggaaccgatggctctgattactcc 218

                                                                       
Query: 61  taccgtatggtagttgattcaaggtatcaactggttgcaaaggggaagaaacgcctctct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 taccgtatggtagttgattcaaggtatcaactggttgcaaaggggaagaaacgcctctct 278

                                                                       
Query: 121 ctgctatttatcattgaggctttggttctattaattggagtggtatttgcatttttacca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ctgctatttatcattgaggctttggttctattaattggagtggtatttgcatttttacca 338

                                                                       
Query: 181 ggaagagagcagcatattccaaataccgcagtcttttcttctgttattgttagtgttgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ggaagagagcagcatattccaaataccgcagtcttttcttctgttattgttagtgttgtt 398

                                                                       
Query: 241 ttggtgatcattgctgatataggtcgaagacgaagccggtccggtttgttgagattttat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ttggtgatcattgctgatataggtcgaagacgaagccggtccggtttgttgagattttat 458

                                                                       
Query: 301 gccattgcatcatctatagcaacacttcaattgattgtttctcttgctatgtggcattcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gccattgcatcatctatagcaacacttcaattgattgtttctcttgctatgtggcattcc 518

                                                                       
Query: 361 ctgccgaaggctatctgggattttggcttttcggaaactaggaggtttgatgccactggt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ctgccgaaggctatctgggattttggcttttcggaaactaggaggtttgatgccactggt 578

                                                                       
Query: 421 tttactggtcttcaagctggtttgctgttatatctgctcactttttccctgttcaagata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tttactggtcttcaagctggtttgctgttatatctgctcactttttccctgttcaagata 638

                                                                       
Query: 481 tggaccatcaaagcagttctttccctgatttttaacatgtctcctcccaagaaatcctct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tggaccatcaaagcagttctttccctgatttttaacatgtctcctcccaagaaatcctct 698

              
Query: 541 tag 543
           |||
Sbjct: 699 tag 701