Miyakogusa Predicted Gene
- Lj6g3v2080300.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2080300.2 tr|G7ILC5|G7ILC5_MEDTR B3 domain-containing
transcription repressor VAL2 OS=Medicago truncatula GN=M,84.15,0,B3
DNA binding domain,B3 DNA binding domain; B3,B3 DNA binding domain;
zf-CW,Zinc finger, CW-type; D,CUFF.60648.2
(2652 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CN825325 similar to UniRef100_A7NY07 Cluster: Chromosom... 1070 0.0
gnl|LJGI|AV410332 weakly similar to UniRef100_A7QYG9 Cluster: Ch... 369 e-101
gnl|LJGI|TC71478 359 6e-98
gnl|LJGI|TC80498 similar to UniRef100_Q6Z3U3 Cluster: VP1/ABI3 f... 56 1e-06
gnl|LJGI|TC60273 similar to UniRef100_A7QFN8 Cluster: Chromosome... 56 1e-06
>gnl|LJGI|CN825325 similar to UniRef100_A7NY07 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (18%)
Length = 541
Score = 1070 bits (540), Expect = 0.0
Identities = 540/540 (100%)
Strand = Plus / Plus
Query: 1157 ttcagtttcgcttctggcccaacaataacagcagaatgtacgttttagagggtgtcactc 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttcagtttcgcttctggcccaacaataacagcagaatgtacgttttagagggtgtcactc 61
Query: 1217 catgcattcagtccatgcagttacaagcaggtgacacagtaacatttagccggttggagc 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 catgcattcagtccatgcagttacaagcaggtgacacagtaacatttagccggttggagc 121
Query: 1277 cagaagggaggttggttatgggatttagaaaggcttcaagtgctatgccatctgatcagg 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cagaagggaggttggttatgggatttagaaaggcttcaagtgctatgccatctgatcagg 181
Query: 1337 ataatgacactaataagaatggaaatggattttctgcacatggtgaagttgaattggcag 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ataatgacactaataagaatggaaatggattttctgcacatggtgaagttgaattggcag 241
Query: 1397 atcctaattcatggtctaaagttgataagtcaggatacatagcaaaagaagcactgggga 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atcctaattcatggtctaaagttgataagtcaggatacatagcaaaagaagcactgggga 301
Query: 1457 gcaaatctttaaaaaagagaaagaccagcatattgggttcaaagagtaaacgtctaaaaa 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gcaaatctttaaaaaagagaaagaccagcatattgggttcaaagagtaaacgtctaaaaa 361
Query: 1517 ttgaaagtgaggatatgatagagctgaaaattacatggcaagaagctcaaggcctgctcc 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttgaaagtgaggatatgatagagctgaaaattacatggcaagaagctcaaggcctgctcc 421
Query: 1577 gaccccctcctaaccttatcccaagcattgtggtgattgaaggttttgaatttgaggaat 1636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gaccccctcctaaccttatcccaagcattgtggtgattgaaggttttgaatttgaggaat 481
Query: 1637 atgaggatgctccagtgcttggaaagccaacaattttcaccaacgataatgatggtgaaa 1696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 atgaggatgctccagtgcttggaaagccaacaattttcaccaacgataatgatggtgaaa 541
>gnl|LJGI|AV410332 weakly similar to UniRef100_A7QYG9 Cluster: Chromosome undetermined
scaffold_247 whole genome shotgun sequence; n=1; Vitis
vinifera|, partial (2%)
Length = 322
Score = 369 bits (186), Expect = e-101
Identities = 186/186 (100%)
Strand = Plus / Plus
Query: 1 atggcggcttctccttcctcttcttcttccaagctctgcttcaattctctctgcaaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atggcggcttctccttcctcttcttcttccaagctctgcttcaattctctctgcaaggaa 196
Query: 61 ttcaagtctgaaagacctaagaaagcttggagacttcgtaccggagacctagccgagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ttcaagtctgaaagacctaagaaagcttggagacttcgtaccggagacctagccgagctt 256
Query: 121 tgtgatcgatgcggctctgcttttgaagaagggaggttctgtgagatttttcactcaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tgtgatcgatgcggctctgcttttgaagaagggaggttctgtgagatttttcactcaaat 316
Query: 181 acttca 186
||||||
Sbjct: 317 acttca 322
>gnl|LJGI|TC71478
Length = 534
Score = 359 bits (181), Expect = 6e-98
Identities = 181/181 (100%)
Strand = Plus / Plus
Query: 2472 gtatctccccaagcatcagactgtgttgaactccggtaccggagattcatcaggtagtca 2531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtatctccccaagcatcagactgtgttgaactccggtaccggagattcatcaggtagtca 60
Query: 2532 gtcacagcagataggagatggagtgagggaagagaaacatagtaatggtgttgttgcaca 2591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcacagcagataggagatggagtgagggaagagaaacatagtaatggtgttgttgcaca 120
Query: 2592 tggcagtagtagtcatagtacggataaggaacatacccaatctttacctatgaatgtgtg 2651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggcagtagtagtcatagtacggataaggaacatacccaatctttacctatgaatgtgtg 180
Query: 2652 a 2652
|
Sbjct: 181 a 181
>gnl|LJGI|TC80498 similar to UniRef100_Q6Z3U3 Cluster: VP1/ABI3 family regulatory
protein-like; n=1; Oryza sativa Japonica Group|Rep:
VP1/ABI3 family regulatory protein-like - Oryza sativa
subsp. japonica (Rice), partial (17%)
Length = 1665
Score = 56.0 bits (28), Expect = 1e-06
Identities = 94/116 (81%)
Strand = Plus / Plus
Query: 1150 tggatatttcagtttcgcttctggcccaacaataacagcagaatgtacgttttagagggt 1209
|||| |||||||||| | || ||||| || || ||||| || ||||| || || ||||||
Sbjct: 1271 tggacatttcagtttagattttggcctaataacaacagtaggatgtatgtattggagggt 1330
Query: 1210 gtcactccatgcattcagtccatgcagttacaagcaggtgacacagtaacatttag 1265
|| || || ||||| ||||||||||||||| || ||||| || |||||||||||
Sbjct: 1331 gtgaccccttgcatacagtccatgcagttatgtgctggtgatactgtaacatttag 1386
>gnl|LJGI|TC60273 similar to UniRef100_A7QFN8 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 1182
Score = 56.0 bits (28), Expect = 1e-06
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 2032 ggctgctcttgcattgtctgcattcagcctcccagtggaaaggg 2075
||||||||||| ||||| ||||||||||| || |||||||||||
Sbjct: 345 ggctgctcttgtattgtgtgcattcagccgccgagtggaaaggg 388