Miyakogusa Predicted Gene

Lj6g3v2078010.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2078010.1 Non Chatacterized Hit- tr|C4J007|C4J007_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,31.03,3e-18,SUBFAMILY
NOT NAMED,NULL; FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS,NULL;
Bromodomain,Bromodomain,CUFF.60618.1
         (1437 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW632678 similar to UniRef100_A7R4S0 Cluster: Chromosom...   934   0.0  

>gnl|LJGI|BW632678 similar to UniRef100_A7R4S0 Cluster: Chromosome undetermined
           scaffold_764, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_764,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (20%)
          Length = 483

 Score =  934 bits (471), Expect = 0.0
 Identities = 474/475 (99%)
 Strand = Plus / Plus

                                                                       
Query: 139 tttactccagagaattgtgaagccaagtatgaagaatttctaaagcggtattctgggagc 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tttactccagagaattgtgaagccaagtatgaagaatttctaaagcggtattctgggagc 60

                                                                       
Query: 199 acggcttggtatgaggagcttaagaaggctagaatagcagagctgaagagagctctggag 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acggcttggtatgaggagcttaagaaggctagaatagcagagctgaagagagctctggag 120

                                                                       
Query: 259 caatctgataaaaagattggggctcttgagtcgaagcttgaatccctcaaggctgagaag 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caatctgataaaaagattggggctcttgagtcgaagcttgaatccctcaaggctgagaag 180

                                                                       
Query: 319 aatgaaaaaatagatgatcgtcatgttgaaaatggctcaggaagtccagcatcacatgaa 378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatgaaaaaatagatgatcgtcatgttgaaaatggctcaggaagtccagcatcacatgaa 240

                                                                       
Query: 379 ccttcacagaagttggagagagttgaatcttccaataaagagctttcgaaggatgggcta 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccttcacagaagttggagagagttgaatcttccaataaagagctttcgaaggatgggcta 300

                                                                       
Query: 439 tctgctgggagtttcacgcatgaaaccaggacaacaaactggtctcctgaacgccaggtt 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctgctgggagtttcacgcatgaaaccaggacaacaaactggtctcctgaacgccaggtt 360

                                                                       
Query: 499 ccagccgaggataccgagactaagcctgaagcttcacactctagtgagcaggttaaagtt 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccagccgaggataccgagactaagcctgaagcttcacactctagtgagcaggttaaagtt 420

                                                                  
Query: 559 ttgaatgtagataacttgacacatactatttatgagggacaagtaggaagtctga 613
           ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 421 ttgaatgtagataacttgacaaatactatttatgagggacaagtaggaagtctga 475