Miyakogusa Predicted Gene
- Lj6g3v2041930.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2041930.1 Non Chatacterized Hit- tr|F6HLI0|F6HLI0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,46.94,5e-19,seg,NULL; ZF_RING_1,Zinc finger, RING-type, conserved
site; zf-C3HC4_2,NULL; no description,Zinc fin,CUFF.60556.1
(740 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65023 similar to UniRef100_Q6R567 Cluster: Ring domai... 1338 0.0
gnl|LJGI|TC58834 similar to UniRef100_Q6R567 Cluster: Ring domai... 159 3e-38
gnl|LJGI|TC79154 similar to UniRef100_Q6R567 Cluster: Ring domai... 60 2e-08
gnl|LJGI|TC75097 similar to UniRef100_Q6R567 Cluster: Ring domai... 60 2e-08
>gnl|LJGI|TC65023 similar to UniRef100_Q6R567 Cluster: Ring domain containing
protein; n=1; Capsicum annuum|Rep: Ring domain
containing protein - Capsicum annuum (Bell pepper),
partial (24%)
Length = 1026
Score = 1338 bits (675), Expect = 0.0
Identities = 675/675 (100%)
Strand = Plus / Plus
Query: 1 atggcatttcagcactacttttcccaggaattgaaaaccaccccaaattctgtgacagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 atggcatttcagcactacttttcccaggaattgaaaaccaccccaaattctgtgacagaa 174
Query: 61 acagaaagttccaatggttgtttcgattgcaacatctgcttagacatcgcacacgaaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 acagaaagttccaatggttgtttcgattgcaacatctgcttagacatcgcacacgaaccg 234
Query: 121 gtagtcaccctctgtggtcacctttactgctggccctgcatctacaagtggctacatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gtagtcaccctctgtggtcacctttactgctggccctgcatctacaagtggctacatgtc 294
Query: 181 caaagtgattctctcgcacctgatgagcatccacaatgccctgtttgtaaggttgacata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 caaagtgattctctcgcacctgatgagcatccacaatgccctgtttgtaaggttgacata 354
Query: 241 tcccacagcacaatggtcccgctgtacggccgagggcacgccccacgtggtgggaaagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tcccacagcacaatggtcccgctgtacggccgagggcacgccccacgtggtgggaaagca 414
Query: 301 tcatgttgtgatctatttacaccaccaagaccacctgcttcaggtgctcaagctcttttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tcatgttgtgatctatttacaccaccaagaccacctgcttcaggtgctcaagctcttttg 474
Query: 361 ggaacatcatcatcatctcaaaattctcagcagcagcagcagcttcaatatcgtaatcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ggaacatcatcatcatctcaaaattctcagcagcagcagcagcttcaatatcgtaatcct 534
Query: 421 tatcaaggtcaatatttcagctctcctttataccaagaagaagatgatgatgccacttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tatcaaggtcaatatttcagctctcctttataccaagaagaagatgatgatgccacttca 594
Query: 481 caaatgttcaatcttggtgcttcaaccatgacaactccaggatcccacccccaccctgta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 caaatgttcaatcttggtgcttcaaccatgacaactccaggatcccacccccaccctgta 654
Query: 541 gtagggatgtttggggagatggttttcgctcgagtgtttggcaactcggaaaatttgtac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gtagggatgtttggggagatggttttcgctcgagtgtttggcaactcggaaaatttgtac 714
Query: 601 gccaacccgaattctcatcagttgatgagaagtaatggctctagaatgagaaggcaagag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gccaacccgaattctcatcagttgatgagaagtaatggctctagaatgagaaggcaagag 774
Query: 661 atgcaggcagacaaa 675
|||||||||||||||
Sbjct: 775 atgcaggcagacaaa 789
>gnl|LJGI|TC58834 similar to UniRef100_Q6R567 Cluster: Ring domain containing
protein; n=1; Capsicum annuum|Rep: Ring domain
containing protein - Capsicum annuum (Bell pepper),
partial (24%)
Length = 975
Score = 159 bits (80), Expect = 3e-38
Identities = 158/184 (85%)
Strand = Plus / Plus
Query: 74 atggttgtttcgattgcaacatctgcttagacatcgcacacgaaccggtagtcaccctct 133
||||| |||| |||||||| |||||||| || | ||||| ||||| || || || || |
Sbjct: 219 atggtggttttgattgcaatatctgcttggagtttgcacatgaaccagtggtgactctat 278
Query: 134 gtggtcacctttactgctggccctgcatctacaagtggctacatgtccaaagtgattctc 193
|||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||
Sbjct: 279 gtggtcacctttactgctggccctgcatctacaagtggctctatgtgcaaagtgcttctc 338
Query: 194 tcgcacctgatgagcatccacaatgccctgtttgtaaggttgacatatcccacagcacaa 253
| ||||||||||||| ||||||||||||||||| |||| || |||||| |||| ||||
Sbjct: 339 ttgcacctgatgagccaccacaatgccctgtttgcaaggatggcatatcacacacaacaa 398
Query: 254 tggt 257
||||
Sbjct: 399 tggt 402
>gnl|LJGI|TC79154 similar to UniRef100_Q6R567 Cluster: Ring domain containing
protein; n=1; Capsicum annuum|Rep: Ring domain
containing protein - Capsicum annuum (Bell pepper),
partial (44%)
Length = 1137
Score = 60.0 bits (30), Expect = 2e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 124 gtcaccctctgtggtcacctttactgctggccctgcatctacaagtggct 173
||||| |||||||| || |||||||||||||||||||| ||||| |||||
Sbjct: 388 gtcactctctgtggccatctttactgctggccctgcatttacaaatggct 437
>gnl|LJGI|TC75097 similar to UniRef100_Q6R567 Cluster: Ring domain containing
protein; n=1; Capsicum annuum|Rep: Ring domain
containing protein - Capsicum annuum (Bell pepper),
partial (44%)
Length = 1190
Score = 60.0 bits (30), Expect = 2e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 124 gtcaccctctgtggtcacctttactgctggccctgcatctacaagtggct 173
||||| |||||||| || |||||||||||||||||||| ||||| |||||
Sbjct: 390 gtcactctctgtggccatctttactgctggccctgcatttacaaatggct 439