Miyakogusa Predicted Gene
- Lj6g3v2017480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2017480.1 Non Chatacterized Hit- tr|I3S8Q2|I3S8Q2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,94.33,0,ZF_SBP,Transcription factor, SBP-box; SBP,Transcription
factor, SBP-box; no description,Transcriptio,gene.g67301.t1.1
(405 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60868 similar to UniRef100_A7QPU0 Cluster: Chromosome... 585 e-167
gnl|LJGI|CN825561 similar to UniRef100_A7QPU0 Cluster: Chromosom... 98 5e-20
gnl|LJGI|GO026435 similar to UniRef100_A7QPU0 Cluster: Chromosom... 96 2e-19
>gnl|LJGI|TC60868 similar to UniRef100_A7QPU0 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 733
Score = 585 bits (295), Expect = e-167
Identities = 345/367 (94%), Gaps = 21/367 (5%)
Strand = Plus / Plus
Query: 60 ggccgtactttatggagaggatggaattaggaagaaaagggtggtggtgactgatctata 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ggccgtactttatggagaggatggaattaggaagaaaagggtggtggtgactgatctata 234
Query: 120 cagcaagagagggtccaaagccggaggctcagctgtgccgccttcttgtcaggtggaggg 179
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 cagcaagagagggttcaaagccggaggctcagctgtgccgccttcttgtcaggtggaggg 294
Query: 180 ttgctatgctgatctaagcggcgctaaggcgtaccaccggcggcacaaggtgtgtgagca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttgctatgctgatctaagcggcgctaaggcgtaccaccggcggcacaaggtgtgtgagca 354
Query: 240 ccatgccaaggctccttccgtactactttctgaacaacagcaa----------------- 282
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ccatgccaaggctccttccgtactactttctgaacaacagcaaaggttttgccagcaatg 414
Query: 283 ----aggtttcatgaactgtcagagtttgatgacacaaaaaggagttgtagaaggcgctt 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cagcaggtttcatgaactgtcagagtttgatgacacaaaaaggagttgtagaaggcgctt 474
Query: 339 ggctggacataatgagaggcgtcgcaaaaatgcatctgaatttcaaggagaaggatttaa 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ggctggacataatgagaggcgtcgcaaaaatgcatctgaatttcaaggagaaggatttaa 534
Query: 399 tggatga 405
|||||||
Sbjct: 535 tggatga 541
>gnl|LJGI|CN825561 similar to UniRef100_A7QPU0 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (71%)
Length = 628
Score = 97.6 bits (49), Expect = 5e-20
Identities = 126/151 (83%), Gaps = 3/151 (1%)
Strand = Plus / Plus
Query: 112 gatctatacagcaagagagggtccaaagccggaggctcagctgtgccgccttcttgtcag 171
|||||||| |||||||||||||| |||| ||| |||||| |||| ||||||||||||
Sbjct: 158 gatctatatagcaagagagggtctaaaggtggaagctcag---tgccaccttcttgtcag 214
Query: 172 gtggagggttgctatgctgatctaagcggcgctaaggcgtaccaccggcggcacaaggtg 231
||||| ||| ||||||||||||| | |||||| ||||||||||||||| |||||
Sbjct: 215 gtggaaaattgtgatgctgatctaagtgaggctaagcagtaccaccggcggcataaggtt 274
Query: 232 tgtgagcaccatgccaaggctccttccgtac 262
|||||| |||||||||| |||| | ||||||
Sbjct: 275 tgtgagtaccatgccaaagctcatgccgtac 305
Score = 95.6 bits (48), Expect = 2e-19
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 289 catgaactgtcagagtttgatgacacaaaaaggagttgtagaaggcgcttggctggacat 348
||||| || ||||| ||||||||| | |||||||||||||| ||||| ||||||| |||
Sbjct: 353 catgagctatcagaatttgatgactctaaaaggagttgtaggaggcgtctggctgggcat 412
Query: 349 aatgagaggcgtcgcaaaaatgca 372
||||||||||||||||||||||||
Sbjct: 413 aatgagaggcgtcgcaaaaatgca 436
>gnl|LJGI|GO026435 similar to UniRef100_A7QPU0 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 528
Score = 95.6 bits (48), Expect = 2e-19
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 289 catgaactgtcagagtttgatgacacaaaaaggagttgtagaaggcgcttggctggacat 348
||||| || ||||| ||||||||| | |||||||||||||| ||||| ||||||| |||
Sbjct: 241 catgagctatcagaatttgatgactctaaaaggagttgtaggaggcgtctggctgggcat 300
Query: 349 aatgagaggcgtcgcaaaaatgca 372
||||||||||||||||||||||||
Sbjct: 301 aatgagaggcgtcgcaaaaatgca 324
Score = 81.8 bits (41), Expect = 3e-15
Identities = 92/109 (84%)
Strand = Plus / Plus
Query: 154 gtgccgccttcttgtcaggtggagggttgctatgctgatctaagcggcgctaaggcgtac 213
||||| ||||||||||||||||| ||| ||||||||||||| | |||||| ||||
Sbjct: 85 gtgccaccttcttgtcaggtggaaaattgtgatgctgatctaagtgaggctaagcggtac 144
Query: 214 caccggcggcacaaggtgtgtgagcaccatgccaaggctccttccgtac 262
||||||||||| ||||| |||||| |||||||||| |||| | ||||||
Sbjct: 145 caccggcggcataaggtttgtgagtaccatgccaaagctcatgccgtac 193