Miyakogusa Predicted Gene
- Lj6g3v2017410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2017410.1 Non Chatacterized Hit- tr|B4FQ41|B4FQ41_MAIZE
Uncharacterized protein OS=Zea mays PE=4
SV=1,58.88,3e-19,Auxin_repressed,Dormancyauxin associated;
seg,NULL,CUFF.61054.1
(345 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78768 homologue to UniRef100_Q9FNV7 Cluster: Auxin-re... 684 0.0
gnl|LJGI|TC76097 homologue to UniRef100_Q9FNV7 Cluster: Auxin-re... 607 e-173
gnl|LJGI|TC81687 similar to UniRef100_Q9FNV7 Cluster: Auxin-repr... 418 e-117
gnl|LJGI|AU088993 similar to UniRef100_A6MZ93 Cluster: Dormancy-... 363 e-100
gnl|LJGI|AV414346 60 9e-09
>gnl|LJGI|TC78768 homologue to UniRef100_Q9FNV7 Cluster: Auxin-repressed protein;
n=1; Robinia pseudoacacia|Rep: Auxin-repressed protein -
Robinia pseudoacacia (Black locust), partial (95%)
Length = 1001
Score = 684 bits (345), Expect = 0.0
Identities = 345/345 (100%)
Strand = Plus / Plus
Query: 1 atggttctgctagagaagctgtgggatgatgttgtggctggccctcaacctgagcgtggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atggttctgctagagaagctgtgggatgatgttgtggctggccctcaacctgagcgtggc 252
Query: 61 cttggcgccctcaggaagctgaccaccaacatcaaagatgaaggagaaggtagcaaatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cttggcgccctcaggaagctgaccaccaacatcaaagatgaaggagaaggtagcaaatta 312
Query: 121 cagagaaacttgtccatgcctccgacaccaacaaccccagggacacccacaacacctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cagagaaacttgtccatgcctccgacaccaacaaccccagggacacccacaacacctggg 372
Query: 181 tcggggcgtaaagctgacaacgtttggaggagcgtgttccatcctggtagcaactccgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tcggggcgtaaagctgacaacgtttggaggagcgtgttccatcctggtagcaactccgcc 432
Query: 241 acaaagaccatcggtggtcaaatgtttgacaaaccactccccaacacccccactgtctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 acaaagaccatcggtggtcaaatgtttgacaaaccactccccaacacccccactgtctat 492
Query: 301 gactggctctacagcggggagacaaggagcaagcaccgctgaggt 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gactggctctacagcggggagacaaggagcaagcaccgctgaggt 537
>gnl|LJGI|TC76097 homologue to UniRef100_Q9FNV7 Cluster: Auxin-repressed protein;
n=1; Robinia pseudoacacia|Rep: Auxin-repressed protein -
Robinia pseudoacacia (Black locust), partial (95%)
Length = 1040
Score = 607 bits (306), Expect = e-173
Identities = 306/306 (100%)
Strand = Plus / Plus
Query: 1 atggttctgctagagaagctgtgggatgatgttgtggctggccctcaacctgagcgtggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 atggttctgctagagaagctgtgggatgatgttgtggctggccctcaacctgagcgtggc 83
Query: 61 cttggcgccctcaggaagctgaccaccaacatcaaagatgaaggagaaggtagcaaatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 cttggcgccctcaggaagctgaccaccaacatcaaagatgaaggagaaggtagcaaatta 143
Query: 121 cagagaaacttgtccatgcctccgacaccaacaaccccagggacacccacaacacctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 cagagaaacttgtccatgcctccgacaccaacaaccccagggacacccacaacacctggg 203
Query: 181 tcggggcgtaaagctgacaacgtttggaggagcgtgttccatcctggtagcaactccgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tcggggcgtaaagctgacaacgtttggaggagcgtgttccatcctggtagcaactccgcc 263
Query: 241 acaaagaccatcggtggtcaaatgtttgacaaaccactccccaacacccccactgtctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acaaagaccatcggtggtcaaatgtttgacaaaccactccccaacacccccactgtctat 323
Query: 301 gactgg 306
||||||
Sbjct: 324 gactgg 329
Score = 81.8 bits (41), Expect = 3e-15
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 305 ggctctacagcggggagacaaggagcaagcaccgctgaggt 345
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 ggctctacagcggggagacaaggagcaagcaccgctgaggt 750
>gnl|LJGI|TC81687 similar to UniRef100_Q9FNV7 Cluster: Auxin-repressed protein; n=1;
Robinia pseudoacacia|Rep: Auxin-repressed protein -
Robinia pseudoacacia (Black locust), partial (85%)
Length = 464
Score = 418 bits (211), Expect = e-117
Identities = 211/211 (100%)
Strand = Plus / Plus
Query: 96 agatgaaggagaaggtagcaaattacagagaaacttgtccatgcctccgacaccaacaac 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 agatgaaggagaaggtagcaaattacagagaaacttgtccatgcctccgacaccaacaac 279
Query: 156 cccagggacacccacaacacctgggtcggggcgtaaagctgacaacgtttggaggagcgt 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 cccagggacacccacaacacctgggtcggggcgtaaagctgacaacgtttggaggagcgt 339
Query: 216 gttccatcctggtagcaactccgccacaaagaccatcggtggtcaaatgtttgacaaacc 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gttccatcctggtagcaactccgccacaaagaccatcggtggtcaaatgtttgacaaacc 399
Query: 276 actccccaacacccccactgtctatgactgg 306
|||||||||||||||||||||||||||||||
Sbjct: 400 actccccaacacccccactgtctatgactgg 430
Score = 176 bits (89), Expect = 6e-44
Identities = 95/97 (97%)
Strand = Plus / Plus
Query: 1 atggttctgctagagaagctgtgggatgatgttgtggctggccctcaacctgagcgtggc 60
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 atggttctgctacacaagctgtgggatgatgttgtggctggccctcaacctgagcgtggc 67
Query: 61 cttggcgccctcaggaagctgaccaccaacatcaaag 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 68 cttggcgccctcaggaagctgaccaccaacatcaaag 104
>gnl|LJGI|AU088993 similar to UniRef100_A6MZ93 Cluster: Dormancy-associated
protein/auxin-repressed protein; n=1; Glycyrrhiza
uralensis|Rep: Dormancy-associated
protein/auxin-repressed protein - Glycyrrhiza uralensis,
partial (65%)
Length = 272
Score = 363 bits (183), Expect = e-100
Identities = 203/211 (96%)
Strand = Plus / Plus
Query: 102 aggagaaggtagcaaattacagagaaacttgtccatgcctccgacaccaacaaccccagg 161
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagaaggtaccaaattacagagaaacttgtccatgcctccgacaccaacaaccccagg 60
Query: 162 gacacccacaacacctgggtcggggcgtaaagctgacaacgtttggaggagcgtgttcca 221
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 61 gacacccacaacacctgggtcggggcgtaaagctgacaacntttggaggagcgtgttcca 120
Query: 222 tcctggtagcaactccgccacaaagaccatcggtggtcaaatgtttgacaaaccactccc 281
|||||||| ||||||||||||||| ||||||||||||| |||||||||||| ||||||||
Sbjct: 121 tcctggtatcaactccgccacaaanaccatcggtggtctaatgtttgacaanccactccc 180
Query: 282 caacacccccactgtctatgactggctctac 312
||||||||||||||||||| | |||||||||
Sbjct: 181 caacacccccactgtctatcantggctctac 211
>gnl|LJGI|AV414346
Length = 378
Score = 60.0 bits (30), Expect = 9e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 316 ggggagacaaggagcaagcaccgctgaggt 345
||||||||||||||||||||||||||||||
Sbjct: 2 ggggagacaaggagcaagcaccgctgaggt 31