Miyakogusa Predicted Gene

Lj6g3v2007290.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2007290.1 tr|B9N3I2|B9N3I2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_784299 PE=4
SV=1,46.81,0.0000000000001,HSP20,Alpha crystallin/Hsp20 domain;
ZF_C3H1,Zinc finger, CCCH-type; coiled-coil,NULL; seg,NULL;
zf-,CUFF.60522.1
         (2583 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79304                                                      293   3e-78

>gnl|LJGI|TC79304 
          Length = 495

 Score =  293 bits (148), Expect = 3e-78
 Identities = 148/148 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2436 aaaatcagttgacaaggtcattagtaccttggagcctcaccagattccgacctccgtaga 2495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    aaaatcagttgacaaggtcattagtaccttggagcctcaccagattccgacctccgtaga 60

                                                                        
Query: 2496 tactgctaagaactatgtgacttcatgtcgggggaaaattgcaaagctggtcatgggata 2555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tactgctaagaactatgtgacttcatgtcgggggaaaattgcaaagctggtcatgggata 120

                                        
Query: 2556 tgtcactaaatatggcaaatcatgatat 2583
            ||||||||||||||||||||||||||||
Sbjct: 121  tgtcactaaatatggcaaatcatgatat 148