Miyakogusa Predicted Gene
- Lj6g3v2007020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2007020.1 Non Chatacterized Hit- tr|I3SCF8|I3SCF8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.67,0,seg,NULL;
no description,Nucleic acid-binding, OB-fold; Nucleic acid-binding
proteins,Nucleic acid-b,CUFF.60500.1
(453 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61879 similar to UniRef100_A7QPS6 Cluster: Chromosome... 882 0.0
gnl|LJGI|GO015241 similar to UniRef100_A7QPS6 Cluster: Chromosom... 781 0.0
gnl|LJGI|TC58739 similar to UniRef100_A7QPS6 Cluster: Chromosome... 301 2e-81
gnl|LJGI|TC79972 similar to UniRef100_A7PJ85 Cluster: Chromosome... 117 6e-26
gnl|LJGI|TC64117 72 3e-12
>gnl|LJGI|TC61879 similar to UniRef100_A7QPS6 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 704
Score = 882 bits (445), Expect = 0.0
Identities = 451/453 (99%)
Strand = Plus / Plus
Query: 1 atggcatcgaatgtggaagaagggaacactaacaaaccggcgaagagaaagcctgtgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 atggcatcgaatgtggaagaagggaacactaacaaaccggcgaagagaaagcctgtgttc 96
Query: 61 accaaagtggatcagctcaaaccaggaaccaacggtcacactttggtcgctaaggtcttg 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 97 accaaagtggatcagctcaaaccaggaaccaacggtcacactctggtcgctaaggtcttg 156
Query: 121 tcctccgacaccgtccttcacaaaggagcaggaggaggagggtcttcttcttcttcccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tcctccgacaccgtccttcacaaaggagcaggaggaggagggtcttcttcttcttcccaa 216
Query: 181 aacattcgtcccaccgtcatcgccgagtgcctcatcggtgatgacaccgccaccgtcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 217 aacattcgtcccaccgtcatcgccgagtgcctcatcggtgatgacaccgccgccgtcatc 276
Query: 241 ttcaccgctcgcaacgaacaagttgagttgatgaagcctggaactacagtaattattcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ttcaccgctcgcaacgaacaagttgagttgatgaagcctggaactacagtaattattcgt 336
Query: 301 aatgcaaagattgacatgtttaagggatcaataaggcttgctgttgacaaatgggggcgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aatgcaaagattgacatgtttaagggatcaataaggcttgctgttgacaaatgggggcgc 396
Query: 361 attgaagtcactgaacctgcaaatttcgtagttaaagaggataccaacttatctcaggtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 attgaagtcactgaacctgcaaatttcgtagttaaagaggataccaacttatctcaggtc 456
Query: 421 gaatatgaattggtgaacgtggttgaagaataa 453
|||||||||||||||||||||||||||||||||
Sbjct: 457 gaatatgaattggtgaacgtggttgaagaataa 489
>gnl|LJGI|GO015241 similar to UniRef100_A7QPS6 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 693
Score = 781 bits (394), Expect = 0.0
Identities = 397/398 (99%)
Strand = Plus / Minus
Query: 56 tgttcaccaaagtggatcagctcaaaccaggaaccaacggtcacactttggtcgctaagg 115
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 693 tgttcaccaaagtggatcagctcagaccaggaaccaacggtcacactttggtcgctaagg 634
Query: 116 tcttgtcctccgacaccgtccttcacaaaggagcaggaggaggagggtcttcttcttctt 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tcttgtcctccgacaccgtccttcacaaaggagcaggaggaggagggtcttcttcttctt 574
Query: 176 cccaaaacattcgtcccaccgtcatcgccgagtgcctcatcggtgatgacaccgccaccg 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 cccaaaacattcgtcccaccgtcatcgccgagtgcctcatcggtgatgacaccgccaccg 514
Query: 236 tcatcttcaccgctcgcaacgaacaagttgagttgatgaagcctggaactacagtaatta 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tcatcttcaccgctcgcaacgaacaagttgagttgatgaagcctggaactacagtaatta 454
Query: 296 ttcgtaatgcaaagattgacatgtttaagggatcaataaggcttgctgttgacaaatggg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttcgtaatgcaaagattgacatgtttaagggatcaataaggcttgctgttgacaaatggg 394
Query: 356 ggcgcattgaagtcactgaacctgcaaatttcgtagttaaagaggataccaacttatctc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggcgcattgaagtcactgaacctgcaaatttcgtagttaaagaggataccaacttatctc 334
Query: 416 aggtcgaatatgaattggtgaacgtggttgaagaataa 453
||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aggtcgaatatgaattggtgaacgtggttgaagaataa 296
>gnl|LJGI|TC58739 similar to UniRef100_A7QPS6 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 842
Score = 301 bits (152), Expect = 2e-81
Identities = 353/420 (84%), Gaps = 15/420 (3%)
Strand = Plus / Plus
Query: 32 acaaaccggcgaagagaaagcctgtgttcaccaaagtggatcagctcaaaccaggaacca 91
|||||||||||||||||||||| || |||||||| ||||||||||| ||||| |||||||
Sbjct: 127 acaaaccggcgaagagaaagcccgttttcaccaaggtggatcagctgaaacctggaacca 186
Query: 92 acggtcacactttggtcgctaaggtcttgtcctccgacaccgtccttcacaaaggagcag 151
|||||||||| |||| |||||||| ||||| || |||||||| | ||||
Sbjct: 187 acggtcacaccctggtggctaaggtgttgtcttctgacaccgtttt----------gcag 236
Query: 152 gaggaggagggtcttcttcttcttcccaaaacattcgtcccaccgtcatcgccgagtgcc 211
||| || | | ||||||||| || ||| |||| ||||| ||||||| |||| |
Sbjct: 237 aagg--gacgaccctcttcttct---cagaaccttcgccccactctcatcgctgagtctc 291
Query: 212 tcatcggtgatgacaccgccaccgtcatcttcaccgctcgcaacgaacaagttgagttga 271
||||||| ||||| |||| | || |||| |||||||||||||||||||||||||||||||
Sbjct: 292 tcatcggcgatgaaaccggcgccatcattttcaccgctcgcaacgaacaagttgagttga 351
Query: 272 tgaagcctggaactacagtaattattcgtaatgcaaagattgacatgtttaagggatcaa 331
|||||||||| | ||||| ||| |||||||||||||||||||||||||||||||||| |
Sbjct: 352 tgaagcctgggaacacagtgattcttcgtaatgcaaagattgacatgtttaagggatcga 411
Query: 332 taaggcttgctgttgacaaatgggggcgcattgaagtcactgaacctgcaaatttcgtag 391
| ||| | ||||||||||||||||| |||||||| || |||||||||||||| |||| ||
Sbjct: 412 tgaggttggctgttgacaaatggggccgcattgaggttactgaacctgcaaaattcgaag 471
Query: 392 ttaaagaggataccaacttatctcaggtcgaatatgaattggtgaacgtggttgaagaat 451
|||||||||||| |||| | |||| |||||||||||||||||| ||||||||||| ||||
Sbjct: 472 ttaaagaggataacaacctgtctctggtcgaatatgaattggttaacgtggttgaggaat 531
>gnl|LJGI|TC79972 similar to UniRef100_A7PJ85 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 431
Score = 117 bits (59), Expect = 6e-26
Identities = 92/103 (89%)
Strand = Plus / Plus
Query: 32 acaaaccggcgaagagaaagcctgtgttcaccaaagtggatcagctcaaaccaggaacca 91
|||||||||||||||||||||| || |||||||| ||||||||||| ||||| |||||||
Sbjct: 168 acaaaccggcgaagagaaagcccgttttcaccaaggtggatcagctgaaacctggaacca 227
Query: 92 acggtcacactttggtcgctaaggtcttgtcctccgacaccgt 134
|||||||||| |||| |||||||| ||||| || ||||||||
Sbjct: 228 acggtcacaccctggtggctaaggtgttgtcttctgacaccgt 270
>gnl|LJGI|TC64117
Length = 759
Score = 71.9 bits (36), Expect = 3e-12
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 298 cgtaatgcaaagattgacatgtttaagggatcaataaggcttgctgttgacaaatggggg 357
||||| || |||||||||||||| |||||||| || ||||| || ||||| | ||||||
Sbjct: 355 cgtaacgccaagattgacatgttcaagggatcgatgaggctagcagttgatagatggggc 414
Query: 358 cgcattgaagtcactgaacctgcaaatttcgtagttaaagagga 401
|| ||||| ||||| |||||||| ||||| | ||| ||||||||
Sbjct: 415 cgtattgaggtcacggaacctgccaattttgaagtgaaagagga 458