Miyakogusa Predicted Gene

Lj6g3v2006420.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2006420.1 tr|A9SHW2|A9SHW2_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_79634
,50.52,6e-18,OPA3,Optic atrophy 3-like; SUBFAMILY NOT NAMED,NULL;
OPTIC ATROPHY 3 PROTEIN (OPA3),Optic atrophy 3-,CUFF.60463.1
         (510 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72980 similar to UniRef100_A7QPQ1 Cluster: Chromosome...   975   0.0  
gnl|LJGI|TC60695 similar to UniRef100_A7PJC1 Cluster: Chromosome...   121   4e-27

>gnl|LJGI|TC72980 similar to UniRef100_A7QPQ1 Cluster: Chromosome chr10 scaffold_138,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_138, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (83%)
          Length = 883

 Score =  975 bits (492), Expect = 0.0
 Identities = 509/512 (99%), Gaps = 2/512 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggttctgccacttttgaaacttggaacgttgttagtcaaaaccctcagcaaaccagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 atggttctgccacttttgaaacttggaacgttgttagtcaaaaccctcagcaaaccagtt 183

                                                                       
Query: 61  gctagtaggctcaagcagcaagctgcacttcaccctaggttccgacaactcatcattaac 120
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 184 gctagtaggctcaagcagcaagctgcacttcaccctaggttctgacaactcatcattaac 243

                                                                       
Query: 121 atggcccaggctaatcatcaagtctcaacaaaaatgcaaaggcgcatctatggtcatgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atggcccaggctaatcatcaagtctcaacaaaaatgcaaaggcgcatctatggtcatgca 303

                                                                       
Query: 181 acagatgttgagattcgccctttgaatgaggagaaagctgttcaagctgctgtagacctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acagatgttgagattcgccctttgaatgaggagaaagctgttcaagctgctgtagacctt 363

                                                                       
Query: 241 attggagaactctttgtcttctcggttgcaggagttcttgtggtctttgaggtacaaaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 attggagaactctttgtcttctcggttgcaggagttcttgtggtctttgaggtacaaaga 423

                                                                       
Query: 301 agtgctagatctgaagcacgaaaggaggagatacgaaagcaagagctaggggctatgaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 agtgctagatctgaagcacgaaaggaggagatacgaaagcaagagctaggggctatgaag 483

                                                                       
Query: 361 caaaagagtgaggac-ttggcacaagaggtagaacttcttaagcatagacttcaagaaat 419
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 caaaagagtgaggactttggcacaagaggtagaacttcttaagcatagacttcaagaaat 543

                                                                       
Query: 420 tgaacagatggccaggggacgaggac-ttgctggtgttctaaatttcagacagggtaata 478
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 544 tgaacagatggccaggggacgaggactttgctggtgttctaaatttcagacagggtaata 603

                                           
Query: 479 cagaaaatgcaaagacagagaaacctgcttga 510
           ||||||||||||||||||||||||||||||||
Sbjct: 604 cagaaaatgcaaagacagagaaacctgcttga 635


>gnl|LJGI|TC60695 similar to UniRef100_A7PJC1 Cluster: Chromosome chr12 scaffold_18,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_18, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (96%)
          Length = 936

 Score =  121 bits (61), Expect = 4e-27
 Identities = 178/217 (82%)
 Strand = Plus / Plus

                                                                       
Query: 110 tcatcattaacatggcccaggctaatcatcaagtctcaacaaaaatgcaaaggcgcatct 169
           ||||||| | ||| |||||||| ||||||  | ||||||| | |||||| || ||||| |
Sbjct: 262 tcatcatcagcattgcccaggccaatcatagattctcaacgagaatgcagagacgcattt 321

                                                                       
Query: 170 atggtcatgcaacagatgttgagattcgccctttgaatgaggagaaagctgttcaagctg 229
           ||||| || |||| |||| || |||||||||  ||||||||||||| |||||||||||||
Sbjct: 322 atggtaatacaactgatgctgcgattcgcccgctgaatgaggagaaggctgttcaagctg 381

                                                                       
Query: 230 ctgtagaccttattggagaactctttgtcttctcggttgcaggagttcttgtggtctttg 289
           |||  ||| |  |||| || |||||||| ||| | |||||||||| |  |||  ||||||
Sbjct: 382 ctgctgacatgcttggggagctctttgtgttcacagttgcaggagctgctgtcatctttg 441

                                                
Query: 290 aggtacaaagaagtgctagatctgaagcacgaaagga 326
           |||| ||||||||| ||||||| |||||| |||||||
Sbjct: 442 aggtgcaaagaagttctagatcagaagcaagaaagga 478