Miyakogusa Predicted Gene
- Lj6g3v2006110.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2006110.2 tr|G7IK78|G7IK78_MEDTR ATP-dependent RNA helicase
dhx8 OS=Medicago truncatula GN=MTR_2g015320 PE=4 S,89.7,0,seg,NULL;
P-loop containing nucleoside triphosphate hydrolases,NULL;
ATP-DEPENDENT RNA HELICASE,NULL,CUFF.60443.2
(2097 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60051 similar to UniRef100_A7QPM6 Cluster: Chromosome... 1413 0.0
gnl|LJGI|TC59608 similar to UniRef100_A7QPM6 Cluster: Chromosome... 1183 0.0
gnl|LJGI|FS320983 similar to UniRef100_A7QPM6 Cluster: Chromosom... 1114 0.0
gnl|LJGI|TC58481 54 4e-06
>gnl|LJGI|TC60051 similar to UniRef100_A7QPM6 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 833
Score = 1413 bits (713), Expect = 0.0
Identities = 783/817 (95%)
Strand = Plus / Plus
Query: 1 atgcagttctggaagccagggacggagaagccggaggctcgggtggtcgacgacggagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 atgcagttctggaagccagggacggagaagccggaggctcgggtggtcgacgacggagaa 76
Query: 61 ggcggtgttctattcatccccggtcccaannnnnnnnnnnnnnnnnnnnnnnnnggatat 120
||||||||||||||||||||||||||||| ||||||
Sbjct: 77 ggcggtgttctattcatccccggtcccaattctctctcttcttcctcttcttctggatat 136
Query: 121 ggatacgcctccatcgagaaacaacggctgcgattgcctgtctacaagtaccgcactgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ggatacgcctccatcgagaaacaacggctgcgattgcctgtctacaagtaccgcactgcc 196
Query: 181 attctctacctcgtcgagactcacgccaccaccatcatcgtcggcgagactggcagtggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 attctctacctcgtcgagactcacgccaccaccatcatcgtcggcgagactggcagtggc 256
Query: 241 aaaaccactcaaatccctcagttcctgaaggaagcaggttgggcttccggtggccgcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aaaaccactcaaatccctcagttcctgaaggaagcaggttgggcttccggtggccgcctc 316
Query: 301 attgcgtgtactcaacctcgacgactagctgttcaggctgttgcttccagagttgcccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 attgcgtgtactcaacctcgacgactagctgttcaggctgttgcttccagagttgcccaa 376
Query: 361 gagatgggtgtccagctcggtgatgaagttggctacaccattaggtttgaagatcttacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gagatgggtgtccagctcggtgatgaagttggctacaccattaggtttgaagatcttacc 436
Query: 421 aaacctgatgtgacggtgattaaatttttgactgacggggtgctcctgagggagatgatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aaacctgatgtgacggtgattaaatttttgactgacggggtgctcctgagggagatgatg 496
Query: 481 gctgatcccctcttgaccaaatacagtgttataatggtggatgaagctcatgaaaggtcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gctgatcccctcttgaccaaatacagtgttataatggtggatgaagctcatgaaaggtcg 556
Query: 541 atttcaactgacattttgcttggactattgaaaaagattcaacggcgtcgaccggagttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 atttcaactgacattttgcttggactattgaaaaagattcaacggcgtcgaccggagttg 616
Query: 601 cgattgattatcgcatctgccactattgaagcgaaatcaatggcagacttcttccgtacg 660
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 617 cgattgattatcgcatccgccactattgaagcgaaatcaatggcagacttcctccgtacg 676
Query: 661 agnnnnnnncgccgggaacctgaaactgaggagcatggactgaaagtggaacctgcaata 720
|| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 agaaaaaaacgccgggaacctgaaactgaggagcatggactgaaagtggaacctgcaata 736
Query: 721 ttatcagttgagggaagaggcttcaatgttcaaattaattatgctgaggaaccagtccaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ttatcagttgagggaagaggcttcaatgttcaaattaattatgctgaggaaccagtccaa 796
Query: 781 gactatgttcaggctgctgtgtcaacagtactcttga 817
|||||||||||||||||||||||||||||||||||||
Sbjct: 797 gactatgttcaggctgctgtgtcaacagtactcttga 833
>gnl|LJGI|TC59608 similar to UniRef100_A7QPM6 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 763
Score = 1183 bits (597), Expect = 0.0
Identities = 597/597 (100%)
Strand = Plus / Plus
Query: 1501 tccagccaacttgggtgttcagaggagataatcacaattgctgctgttctttctgtccaa 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccagccaacttgggtgttcagaggagataatcacaattgctgctgttctttctgtccaa 60
Query: 1561 tctatctggatcgcaggaagagggatacaaaaggaatcagatgaagcgaaattgagattt 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctatctggatcgcaggaagagggatacaaaaggaatcagatgaagcgaaattgagattt 120
Query: 1621 gctgctgccgagggtgaccatgtaacgttccttaatttatacaaggggttccatcagtct 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctgctgccgagggtgaccatgtaacgttccttaatttatacaaggggttccatcagtct 180
Query: 1681 ggtaaatcttcacaatggtgtcacaaaaatttcgtgaactatcatgccatgaaaaaggtt 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtaaatcttcacaatggtgtcacaaaaatttcgtgaactatcatgccatgaaaaaggtt 240
Query: 1741 cttgaagttagagaacaactcaggagaattgcacagaggataggcttagtcttaaagtct 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttgaagttagagaacaactcaggagaattgcacagaggataggcttagtcttaaagtct 300
Query: 1801 tgcgaaagtgatatacaggtggtgagaaaagcagttactgctggctttttcgctaatgca 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcgaaagtgatatacaggtggtgagaaaagcagttactgctggctttttcgctaatgca 360
Query: 1861 tgcaatcttgaggcatacagccataatgggatgtacaagacattaagaggatcacaagaa 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgcaatcttgaggcatacagccataatgggatgtacaagacattaagaggatcacaagaa 420
Query: 1921 gtttatattcacccatcgtcggtgctattcagagtaaatccgaagtgggttatatacact 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtttatattcacccatcgtcggtgctattcagagtaaatccgaagtgggttatatacact 480
Query: 1981 tctcttgtatcaactgatcgacaatacatgcgtaatgtcatgacaatagatccatcgtgg 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctcttgtatcaactgatcgacaatacatgcgtaatgtcatgacaatagatccatcgtgg 540
Query: 2041 ctattggaggctgctcctcacttctaccagctacaacaaccgaatcttcgtcactaa 2097
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctattggaggctgctcctcacttctaccagctacaacaaccgaatcttcgtcactaa 597
>gnl|LJGI|FS320983 similar to UniRef100_A7QPM6 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 657
Score = 1114 bits (562), Expect = 0.0
Identities = 627/657 (95%), Gaps = 5/657 (0%)
Strand = Plus / Plus
Query: 11 ggaagccagggacggagaagccggaggctcgggtggtcgacgacggagaaggcggtgttc 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaagccagggacggagaagccggaggctcgggtggtcgacgacggagaaggcggtgttc 60
Query: 71 tattcatccccggtcccaannnnnnnnnnnnnnnnnnnnnnnnnggatatggatacgcct 130
||||||||||||||||||| ||||||||||||||||
Sbjct: 61 tattcatccccggtcccaattctctctcttcttcctcttcttctggatatggatacgcct 120
Query: 131 ccatcgagaaacaacggctgcgattgcctgtctacaagtaccgcactgccattctctacc 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccatcgagaaacaacggctgcgattgcctgtctacaagtaccgcactgccattctctacc 180
Query: 191 tcgtcgagactcacgccaccaccatcatcgtcggcgagactggcagtggcaaaaccactc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgtcgagactcacgccaccaccatcatcgtcggcgagactggcagtggcaaaaccactc 240
Query: 251 aaatccctcagttcctgaaggaagcaggttgggcttccggtggccgcctcattgcgtgta 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaatccctcagttcctgaaggaagcaggttgggcttccggtggccgcctcattgcgtgta 300
Query: 311 ctcaacctcgacgactagctgttcaggctgttgcttccagagttgcccaagagatgggtg 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctcaacctcgacgactagctgttcaggctgttgcttccagagttgcccaagagatgggtg 360
Query: 371 tccagctcggtgatgaagttggctacaccattaggtttgaagatcttaccaaacct---- 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tccagctcggtgatgaagttggctacaccattaggtttgaagatcttaccaaacctaaca 420
Query: 427 -gatgtgacggtgattaaatttttgactgacggggtgctcctgagggagatgatggctga 485
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggatgtgacggtgattaaatttttgactgacggggtgctcctgagggagatgatggctga 480
Query: 486 tcccctcttgaccaaatacagtgttataatggtggatgaagctcatgaaaggtcgatttc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcccctcttgaccaaatacagtgttataatggtggatgaagctcatgaaaggtcgatttc 540
Query: 546 aactgacattttgcttggactattgaaaaagattcaacggcgtcgaccggagttgcgatt 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aactgacattttgcttggactattgaaaaagattcaacggcgtcgaccggagttgcgatt 600
Query: 606 gattatcgcatctgccactattgaagcgaaatcaatggcagacttcttccgtacgag 662
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gattatcgcatctgccactattgaagcgaaatcaatggcagacttcttccgtacgag 657
>gnl|LJGI|TC58481
Length = 776
Score = 54.0 bits (27), Expect = 4e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 226 gagactggcagtggcaaaaccactcaaatccctcagttc 264
|||||||| |||||||||||||| || ||||||||||||
Sbjct: 357 gagactggtagtggcaaaaccacccagatccctcagttc 395