Miyakogusa Predicted Gene
- Lj6g3v1984570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1984570.1 tr|E6ZGH5|E6ZGH5_DICLA SAP30-binding protein
OS=Dicentrarchus labrax GN=SAP30BP PE=4
SV=1,29.82,2e-17,HCNGP,HCNGP-like; TRANSCRIPTIONAL REGULATOR PROTEIN
HCNGP,HCNGP-like; coiled-coil,NULL; seg,NULL,CUFF.60400.1
(1146 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS340332 similar to UniRef100_A7QDI5 Cluster: Chromosom... 1166 0.0
gnl|LJGI|TC74514 similar to UniRef100_A7QDI5 Cluster: Chromosome... 521 e-147
gnl|LJGI|FS343230 similar to UniRef100_Q6DXR5 Cluster: Predicted... 325 3e-88
gnl|LJGI|TC77690 similar to UniRef100_Q6DXR5 Cluster: Predicted ... 325 3e-88
gnl|LJGI|BP050201 similar to UniRef100_A7QDI5 Cluster: Chromosom... 270 2e-71
gnl|LJGI|TC81574 similar to UniRef100_Q53VM3 Cluster: Ser/Thr pr... 52 8e-06
>gnl|LJGI|FS340332 similar to UniRef100_A7QDI5 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 778
Score = 1166 bits (588), Expect = 0.0
Identities = 609/616 (98%)
Strand = Plus / Plus
Query: 1 atggcgtccaagaagaagcaatcggaaggcatcgccttgctgtccatgtacaacgacgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 atggcgtccaagaagaagcaatcggaaggcatcgccttgctgtccatgtacaacgacgat 222
Query: 61 gatgtggacgaagacatggaggatgtcgaagtagacgacgaggacgacgacgcagagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gatgtggacgaagacatggaggatgtcgaagtagacgacgaggacgacgacgcagagaac 282
Query: 121 cgcgtggagcagcaagaagatgccgccggagatgcgagattcgctgcggcgggggaggat 180
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 283 cgcgtggagcagcaagaagatgccgccggagatgcgagattcgcggttacgggggaggat 342
Query: 181 ttggcgactgatgtcaataatttcgttaacgaggctgctgctgttgtgtccacctcgata 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ttggcgagtgatgtcaataatttcgttaacgaggctgctgctgttgtgtccacctcgata 402
Query: 241 gagaggagtgggttgggggcttccacgacgccgcaggccaacacgtgggtttcgccaccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gagaggagtgggttgggggcttccacgacgccgcaggccaacacgtgggtttcgccaccg 462
Query: 301 ctagagcaacgggtggtgtcgtcgtttacgaaaattagtaggagagagacgcttacgata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ctagagcaacgggtggtgtcgtcgtttacgaaaattagtaggagagagacgcttacgata 522
Query: 361 gtggactatggccatgatgaagcagcaatgtcacctgaacctgaggagggtgagatagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gtggactatggccatgatgaagcagcaatgtcacctgaacctgaggagggtgagatagat 582
Query: 421 ggtagtggccgagtcatgtttggggaccagcttcatgctaccaatggtgattcgctggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ggtagtggccgagtcatgtttggggaccagcttcatgctaccaatggtgattcgctggat 642
Query: 481 agaacaccatccggaacagtccaggttttgaccccaagccatgctaacacaactcaattt 540
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 agaacaccatctggaacagtccaggttttgaccccaagccatgctaacacaactcaattt 702
Query: 541 tctgagccattgaaatttgataccatgaacattgatgctgtgatcagaacagatgataca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tctgagccattgaaatttgataccatgaacattgatgctgtgatcagaacagatgataca 762
Query: 601 gaacttgaagaagcag 616
||||||| ||||||||
Sbjct: 763 gaacttggagaagcag 778
>gnl|LJGI|TC74514 similar to UniRef100_A7QDI5 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 636
Score = 521 bits (263), Expect = e-147
Identities = 263/263 (100%)
Strand = Plus / Plus
Query: 874 gatccaagcgacttctatgatgaaatagaagctgatatgaggcgtgaaagtgagaggaaa 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatccaagcgacttctatgatgaaatagaagctgatatgaggcgtgaaagtgagaggaaa 60
Query: 934 gagcaagagaagaagaaagctcagaaggttgactttgtttctgggagtacacaaccagga 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagcaagagaagaagaaagctcagaaggttgactttgtttctgggagtacacaaccagga 120
Query: 994 attgcggctggtcctcccaggattagcattcctgttgcaggagcttctgctgcaacagca 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attgcggctggtcctcccaggattagcattcctgttgcaggagcttctgctgcaacagca 180
Query: 1054 agtggtttgcatttggtgcctccgggagctgattctataaatagggatggtagacagaac 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtggtttgcatttggtgcctccgggagctgattctataaatagggatggtagacagaac 240
Query: 1114 aaaaaatcaaaatgggacaaggt 1136
|||||||||||||||||||||||
Sbjct: 241 aaaaaatcaaaatgggacaaggt 263
>gnl|LJGI|FS343230 similar to UniRef100_Q6DXR5 Cluster: Predicted protein; n=1;
Gossypium hirsutum|Rep: Predicted protein - Gossypium
hirsutum (Upland cotton) (Gossypium mexicanum), partial
(5%)
Length = 708
Score = 325 bits (164), Expect = 3e-88
Identities = 214/230 (93%), Gaps = 3/230 (1%)
Strand = Plus / Plus
Query: 466 ggtgattcgctggatagaacaccatccggaacagtccaggttttgaccccaagc---cat 522
||||||| || ||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 361 ggtgatttgccggatagaacaccatcaggaacagtccaggttttgaccccaagcaatcat 420
Query: 523 gctaacacaactcaattttctgagccattgaaatttgataccatgaacattgatgctgtg 582
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 421 gctaacacacctcaattttctgagccaatgaaatttgataccatgaacattgatgctgtg 480
Query: 583 atcagaacagatgatacagaacttgaagaagcagatcaagacgagcaaaaatctggagat 642
||||||||||||||| | ||||| | |||||||||||||||||||| |||||||||||||
Sbjct: 481 atcagaacagatgatgctgaactcggagaagcagatcaagacgagccaaaatctggagat 540
Query: 643 ccattggataaatttctccctccaccacccaaagctaaatgctccgagga 692
||||||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 541 ccattggattactttctccctccaccacccaaagctagatgctccgagga 590
>gnl|LJGI|TC77690 similar to UniRef100_Q6DXR5 Cluster: Predicted protein; n=1;
Gossypium hirsutum|Rep: Predicted protein - Gossypium
hirsutum (Upland cotton) (Gossypium mexicanum), partial
(5%)
Length = 485
Score = 325 bits (164), Expect = 3e-88
Identities = 214/230 (93%), Gaps = 3/230 (1%)
Strand = Plus / Plus
Query: 466 ggtgattcgctggatagaacaccatccggaacagtccaggttttgaccccaagc---cat 522
||||||| || ||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 7 ggtgatttgccggatagaacaccatcaggaacagtccaggttttgaccccaagcaatcat 66
Query: 523 gctaacacaactcaattttctgagccattgaaatttgataccatgaacattgatgctgtg 582
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 67 gctaacacacctcaattttctgagccaatgaaatttgataccatgaacattgatgctgtg 126
Query: 583 atcagaacagatgatacagaacttgaagaagcagatcaagacgagcaaaaatctggagat 642
||||||||||||||| | ||||| | |||||||||||||||||||| |||||||||||||
Sbjct: 127 atcagaacagatgatgctgaactcggagaagcagatcaagacgagccaaaatctggagat 186
Query: 643 ccattggataaatttctccctccaccacccaaagctaaatgctccgagga 692
||||||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 187 ccattggattactttctccctccaccacccaaagctagatgctccgagga 236
>gnl|LJGI|BP050201 similar to UniRef100_A7QDI5 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 497
Score = 270 bits (136), Expect = 2e-71
Identities = 142/144 (98%)
Strand = Plus / Minus
Query: 988 ccaggaattgcggctggtcctcccaggattagcattcctgttgcaggagcttctgctgca 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ccaggaattgcggctggtcctcccaggattagcattcctgttgcaggagcttctgctgca 438
Query: 1048 acagcaagtggtttgcatttggtgcctccgggagctgattctataaatagggatggtaga 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 acagcaagtggtttgcatttggtgcctccgggagctgattctataaatagggatggtaga 378
Query: 1108 cagaacaaaaaatcaaaatgggac 1131
|||||| ||||||| |||||||||
Sbjct: 377 cagaaccaaaaatccaaatgggac 354
>gnl|LJGI|TC81574 similar to UniRef100_Q53VM3 Cluster: Ser/Thr protein kinase; n=1;
Lotus japonicus|Rep: Ser/Thr protein kinase - Lotus
japonicus, partial (6%)
Length = 995
Score = 52.0 bits (26), Expect = 8e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 466 ggtgattcgctggatagaacaccatccggaacagtcca 503
||||||||||| |||||| ||||||| |||||||||||
Sbjct: 405 ggtgattcgctagatagagcaccatcaggaacagtcca 442