Miyakogusa Predicted Gene
- Lj6g3v1966840.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1966840.2 tr|G7ILM2|G7ILM2_MEDTR Peptide transporter PTR1
OS=Medicago truncatula GN=MTR_2g017750 PE=4 SV=1,80.43,0,seg,NULL; MFS
general substrate transporter,Major facilitator superfamily domain,
general substrate ,CUFF.60351.2
(1806 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV416871 similar to UniRef100_A7QDD0 Cluster: Chromosom... 180 2e-44
gnl|LJGI|AV766852 similar to UniRef100_A7QDD0 Cluster: Chromosom... 174 1e-42
>gnl|LJGI|AV416871 similar to UniRef100_A7QDD0 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 354
Score = 180 bits (91), Expect = 2e-44
Identities = 287/350 (82%), Gaps = 3/350 (0%)
Strand = Plus / Plus
Query: 857 tatacgagattggacaggacaaggaagctgatgtggagatagagtttctacctcatagag 916
|||| ||||||| ||||||||| ||||||| |||| ||||||||||||||||||||||
Sbjct: 1 tatatgagattgaacaggacaaagaagctgtaatggaaatagagtttctacctcatagag 60
Query: 917 acattttcaggttcttggacagagcagccatccaagaaaattttgatgagcaatctaact 976
|||||||||||||||| |||| ||||||||||||| | | | |||| | | |||
Sbjct: 61 acattttcaggttcttagacaaagcagccatccaaagagaatgtgatatggag-ctagag 119
Query: 977 ctaactcagaggctccaaacccatggaaactttgcagggttacccaagtagaaaatgcca 1036
|| ||||| || ||| || ||||||||| ||||| || ||||||||||| |||||||
Sbjct: 120 --aaaccagagtctacaagccaatggaaactatgcagagtcacccaagtagagaatgcca 177
Query: 1037 aaatcatacttggcatggtcccaatattctgctgcacaattataatgaccctttgcctag 1096
||||||| || |||||| |||| |||||| |||||||| |||||||||||||||||||
Sbjct: 178 aaatcattctaagcatgggcccagtattcttgtgcacaatcataatgaccctttgcctag 237
Query: 1097 ctcagctccaaaccttttcaatcatacaaggctacacaatggacaccagcttcaccaaac 1156
| ||| |||||||||| ||| || ||||| ||||| |||||||||| |||||||
Sbjct: 238 cacagatccaaaccttctcagtccagcaaggttacaccatggacaccaaaatcaccaagg 297
Query: 1157 attttcacatcccaccagcatccctcccaatcatcccagtcatgttctta 1206
| || |||| || ||||||||||||||||||||||| ||||| ||||||
Sbjct: 298 acttcaacatgcctccagcatccctcccaatcatcccggtcatcttctta 347
>gnl|LJGI|AV766852 similar to UniRef100_A7QDD0 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 492
Score = 174 bits (88), Expect = 1e-42
Identities = 124/136 (91%)
Strand = Plus / Minus
Query: 1633 agtgggggctggttagcagggaacaatattaacagaaaccatgttaacctgttctacttt 1692
||||| ||||||||||||||||||||||| |||||||||||| | ||| ||||||||||
Sbjct: 442 agtggaggctggttagcagggaacaatatcaacagaaaccatctgaacttgttctacttg 383
Query: 1693 ttcctttccatagtgagcttgatcaacttctgtatctatttgattctttcaaagaggtac 1752
||||||||||| |||||||||||||||||| ||||||||||||| |||| |||| ||||
Sbjct: 382 ttcctttccattctgagcttgatcaacttctttatctatttgattgtttccaagatgtac 323
Query: 1753 aagtacaggcctcaag 1768
||||||||||||||||
Sbjct: 322 aagtacaggcctcaag 307