Miyakogusa Predicted Gene

Lj6g3v1966780.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1966780.1 tr|Q533S1|Q533S1_LOTJA MADS box protein AGa
(Fragment) OS=Lotus japonicus PE=2 SV=1,97.67,0,K_BOX,Transcription
factor, K-box; coiled-coil,NULL; seg,NULL; K-box,Transcription factor,
K-box; MA,CUFF.60326.1
         (387 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67825 UniRef100_Q533S1 Cluster: MADS box protein AGa;...   630   e-180
gnl|LJGI|TC75483 UniRef100_Q533S0 Cluster: MADS box protein AGb;...   170   4e-42

>gnl|LJGI|TC67825 UniRef100_Q533S1 Cluster: MADS box protein AGa; n=1; Lotus
           japonicus|Rep: MADS box protein AGa - Lotus japonicus,
           complete
          Length = 1152

 Score =  630 bits (318), Expect = e-180
 Identities = 364/387 (94%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatgggtgagtctttgggctctatgaatgccaaggaactcaaaaacctggagactaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 atgatgggtgagtctttgggctctatgaatgccaaggaactcaaaaacctggagactaag 463

                                                                       
Query: 61  ttagaaaaaggaattagtaggattcgttccaaaaagaatgagctactatttgctgaaatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ttagaaaaaggaattagtaggattcgttccaaaaagaatgagctactatttgctgaaatt 523

                                                                       
Query: 121 gagtacatgcagaaaagggagatagacttgcacaataacaaccagcttcttcgggcaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gagtacatgcagaaaagggagatagacttgcacaataacaaccagcttcttcgggcaaag 583

                                                                       
Query: 181 atagctgaaagtgagaggaaccaccctaacttgagcattttggctgggagcacctcaaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 atagctgaaagtgagaggaaccaccctaacttgagcattttggctgggagcacctcaaac 643

                                                                       
Query: 241 tatgagtctatgcaatctnnnnnnnnnnnnnnnnnnnnnnnattcgactctcgcggctac 300
           ||||||||||||||||||                       |||||||||||||||||||
Sbjct: 644 tatgagtctatgcaatctcagcagcagcaacagcagcagcaattcgactctcgcggctac 703

                                                                       
Query: 301 ttccaagtcactggattacaacccactacacatactcagtattcgcgccaagaccagatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 ttccaagtcactggattacaacccactacacatactcagtattcgcgccaagaccagatc 763

                                      
Query: 361 tcattacaacccagtagtcagtatgca 387
           |||||||||||||||||||||||||||
Sbjct: 764 tcattacaacccagtagtcagtatgca 790


>gnl|LJGI|TC75483 UniRef100_Q533S0 Cluster: MADS box protein AGb; n=1; Lotus
           japonicus|Rep: MADS box protein AGb - Lotus japonicus,
           complete
          Length = 960

 Score =  170 bits (86), Expect = 4e-42
 Identities = 149/170 (87%)
 Strand = Plus / Plus

                                                                       
Query: 25  atgaatgccaaggaactcaaaaacctggagactaagttagaaaaaggaattagtaggatt 84
           |||||||||| ||| ||||||||||| ||||| || ||||||||||||||||| || |||
Sbjct: 352 atgaatgccagggatctcaaaaaccttgagacaaaattagaaaaaggaattagcagaatt 411

                                                                       
Query: 85  cgttccaaaaagaatgagctactatttgctgaaattgagtacatgcagaaaagggagata 144
           || ||||| ||||| ||| | |||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 412 cgatccaagaagaacgagatgctatttgcagaaatcgagtatatgcagaaaagggagata 471

                                                             
Query: 145 gacttgcacaataacaaccagcttcttcgggcaaagatagctgaaagtga 194
           |||||||| |||| ||| ||||||||| | ||||||||||| ||||||||
Sbjct: 472 gacttgcataatagcaatcagcttcttagagcaaagatagcagaaagtga 521