Miyakogusa Predicted Gene

Lj6g3v1966600.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1966600.1 Non Chatacterized Hit- tr|I3SGZ1|I3SGZ1_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,73.33,0.0000000000001, ,CUFF.60323.1
         (142 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60528 similar to UniRef100_A7QV59 Cluster: Chromosome...   157   2e-38
gnl|LJGI|TC66002 similar to UniRef100_A7QV59 Cluster: Chromosome...    72   9e-13
gnl|LJGI|TC70267 similar to UniRef100_A7QV59 Cluster: Chromosome...    56   6e-08

>gnl|LJGI|TC60528 similar to UniRef100_A7QV59 Cluster: Chromosome undetermined
            scaffold_186, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_186, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (93%)
          Length = 1339

 Score =  157 bits (79), Expect = 2e-38
 Identities = 115/127 (90%)
 Strand = Plus / Plus

                                                                        
Query: 16   ttcctgttttgggatgcatttcatccaactgaggctggcaacagtgttattggtgggaga 75
            ||||||||||||||||||||||||||| ||||||||||||||| ||| |||||  |||||
Sbjct: 1032 ttcctgttttgggatgcatttcatccatctgaggctggcaacaatgtaattggaaggaga 1091

                                                                        
Query: 76   gcttacagtgcccaatatgaatcagatgcttacccttttgatatcagaagcttggctcaa 135
            ||||||| |||||||| || ||| ||||||||||||||||||||||   |||||||||||
Sbjct: 1092 gcttacaatgcccaatctgcatcggatgcttacccttttgatatcaatcgcttggctcaa 1151

                   
Query: 136  atgtaag 142
            |||||||
Sbjct: 1152 atgtaag 1158


>gnl|LJGI|TC66002 similar to UniRef100_A7QV59 Cluster: Chromosome undetermined
           scaffold_186, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_186,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (57%)
          Length = 873

 Score = 71.9 bits (36), Expect = 9e-13
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                       
Query: 22  ttttgggatgcatttcatccaactgaggctggcaacagtgttattggtgggagagcttac 81
           ||||||||||||||||||||||| || ||||| |||| | | |||||| |||||||||||
Sbjct: 508 ttttgggatgcatttcatccaacagaagctgggaacactatcattggtaggagagcttac 567

                                                   
Query: 82  agtgcccaatatgaatcagatgcttacccttttgatatca 121
           |   | |||| || ||| |||||||||||  |||||||||
Sbjct: 568 aactctcaatctgcatctgatgcttacccaattgatatca 607


>gnl|LJGI|TC70267 similar to UniRef100_A7QV59 Cluster: Chromosome undetermined
           scaffold_186, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_186,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (87%)
          Length = 1203

 Score = 56.0 bits (28), Expect = 6e-08
 Identities = 82/100 (82%)
 Strand = Plus / Plus

                                                                       
Query: 20  tgttttgggatgcatttcatccaactgaggctggcaacagtgttattggtgggagagctt 79
           ||||||||||||| |||||||| | ||||||||| ||   ||||||||    ||||||||
Sbjct: 846 tgttttgggatgcctttcatcctagtgaggctgggaatgttgttattgcacagagagctt 905

                                                   
Query: 80  acagtgcccaatatgaatcagatgcttacccttttgatat 119
           ||||||| |||| |  ||| |||||||| ||| |||||||
Sbjct: 906 acagtgctcaatctccatctgatgcttatcctattgatat 945