Miyakogusa Predicted Gene

Lj6g3v1966510.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1966510.2 Non Chatacterized Hit- tr|J3L1H7|J3L1H7_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G3,34.48,2e-18,zf-MYND,Zinc finger, MYND-type;
PDCD2_C,Programmed cell death protein 2, C-terminal; ZF_MYND_1,Zinc
,CUFF.60332.2
         (624 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61256 weakly similar to UniRef100_Q10MP9 Cluster: Pro...   652   0.0  
gnl|LJGI|TC74963 similar to UniRef100_A7Q0H5 Cluster: Chromosome...   595   e-169

>gnl|LJGI|TC61256 weakly similar to UniRef100_Q10MP9 Cluster: Programmed cell death
           protein 2, C-terminal domain containing protein,
           expressed; n=1; Oryza sativa Japonica Group|Rep:
           Programmed cell death protein 2, C-terminal domain
           containing protein, expressed - Oryza sativa subsp.
           japonica (Rice), partial (25%)
          Length = 764

 Score =  652 bits (329), Expect = 0.0
 Identities = 329/329 (100%)
 Strand = Plus / Plus

                                                                       
Query: 296 cagggcataaaattgcttgccagcagataaaagtttcttcatctgttagtggacccaaca 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cagggcataaaattgcttgccagcagataaaagtttcttcatctgttagtggacccaaca 60

                                                                       
Query: 356 aaagtgtaacaacctcattggagtctcgtaaggttggaagcaacaatgtgtggcctgaat 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaagtgtaacaacctcattggagtctcgtaaggttggaagcaacaatgtgtggcctgaat 120

                                                                       
Query: 416 ttgagatcaccattgaagatgaaagtgaatataacagagacatatccgataccttagcta 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgagatcaccattgaagatgaaagtgaatataacagagacatatccgataccttagcta 180

                                                                       
Query: 476 attccttgagattaagtgattccttgatctcgaagaatacggctgatgaatcaatgaatt 535
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attccttgagattaagtgattccttgatctcgaagaatacggctgatgaatcaatgaatt 240

                                                                       
Query: 536 tagatttagatagctttcagggtgatgatgagaaaaagagctgggtctccttccaggatc 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagatttagatagctttcagggtgatgatgagaaaaagagctgggtctccttccaggatc 300

                                        
Query: 596 gaattgccaaagcccctgaacaagtgttg 624
           |||||||||||||||||||||||||||||
Sbjct: 301 gaattgccaaagcccctgaacaagtgttg 329


>gnl|LJGI|TC74963 similar to UniRef100_A7Q0H5 Cluster: Chromosome chr7 scaffold_42,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_42, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (43%)
          Length = 709

 Score =  595 bits (300), Expect = e-169
 Identities = 303/304 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctgtttgtttttatatgtccttctatgacatgtcttctcagggatcagcatgagcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 atgctgtttgtttttatatgtccttctatgacatgtcttctcagggatcagcatgagcaa 465

                                                                       
Query: 61  tggaaacgccaccctgaaagaccatctagaagtgtgaaggttttccgttgtcagttacct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tggaaacgccaccctgaaagaccatctagaagtgtgaaggttttccgttgtcagttacct 525

                                                                       
Query: 121 tgtgttaatccgttttactcaagcgaatgccctaaggatgatggaagccacaagcctgcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tgtgttaatccgttttactcaagcgaatgccctaaggatgatggaagccacaagcctgcc 585

                                                                       
Query: 181 accagtggagctgctctttgtgattggtgtggcacttggaaaggagataagctctgtagt 240
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 586 accagtggagctgctctttgtgattggtgtggcacttggaaaggtgataagctctgtagt 645

                                                                       
Query: 241 agttgcagacaagtgcggtattgctgtgaaaaacaccaggtcatgagttggcgctcaggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 agttgcagacaagtgcggtattgctgtgaaaaacaccaggtcatgagttggcgctcaggg 705

               
Query: 301 cata 304
           ||||
Sbjct: 706 cata 709