Miyakogusa Predicted Gene

Lj6g3v1955280.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1955280.1 tr|G7ILW5|G7ILW5_MEDTR ABC transporter B family
member OS=Medicago truncatula GN=MTR_2g018320 PE=3
S,91.57,0,ABC_TRANSPORTER_2,ABC transporter-like; ABC_tran,ABC
transporter-like; ABC_TRANSPORTER_1,ABC transpo,CUFF.60303.1
         (503 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS350102 similar to UniRef100_A7QQI4 Cluster: Chromosom...   165   3e-40
gnl|LJGI|FS361887 similar to UniRef100_A7Q0Z8 Cluster: Chromosom...    52   3e-06

>gnl|LJGI|FS350102 similar to UniRef100_A7QQI4 Cluster: Chromosome undetermined
           scaffold_143, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_143,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (8%)
          Length = 479

 Score =  165 bits (83), Expect = 3e-40
 Identities = 137/155 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtttggttggtcaagagccaattcttttcaatgaaagcattcgcgctaacattgct 60
           |||||||||||||||||| | || ||||||||||| ||||||||||| ||||||||||||
Sbjct: 325 atgggtttggttggtcaaaatcctattcttttcaacgaaagcattcgggctaacattgct 384

                                                                       
Query: 61  tatggcaaagagggtggtgttgccgatgatgagataattgcagcagctcaagcagccaat 120
           |||||||| ||||| |||| | |  | ||  | |||||| ||||||| ||||||||||||
Sbjct: 385 tatggcaacgagggaggtgcttcaaaggaaaaaataatttcagcagcacaagcagccaat 444

                                              
Query: 121 gcacacaacttcataagttctcttccaaatggtta 155
           |||||||| ||||||||||||||||||||||||||
Sbjct: 445 gcacacaagttcataagttctcttccaaatggtta 479


>gnl|LJGI|FS361887 similar to UniRef100_A7Q0Z8 Cluster: Chromosome chr7 scaffold_42,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_42, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 748

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                       
Query: 190 tctggagggcaaaagcagcgtattgccattgcaagagcgatgctgaagggccccagaatc 249
           ||||| || ||||||||||| ||||| ||||||||||| || || || |  || ||||| 
Sbjct: 255 tctggtggacaaaagcagcgcattgcgattgcaagagcaatcctaaaagatccaagaatt 196

                                                                       
Query: 250 cttctacttgatgaggcaactagtgcacttgatgctgagtcggaacgcgtagttcaagag 309
           || || || ||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||
Sbjct: 195 ctacttctagatgaagcaacaagcgcacttgattcggagtctgaaagggtagtgcaagag 136

             
Query: 310 gc 311
           ||
Sbjct: 135 gc 134