Miyakogusa Predicted Gene

Lj6g3v1954220.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1954220.1 Non Chatacterized Hit- tr|J3LP01|J3LP01_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB03G2,36.36,2.9,
,NODE_101337_length_578_cov_7.996540.path2.1
         (168 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70369 similar to UniRef100_A7P111 Cluster: Chromosome...    52   1e-06
gnl|LJGI|TC67986 similar to UniRef100_A7P111 Cluster: Chromosome...    52   1e-06

>gnl|LJGI|TC70369 similar to UniRef100_A7P111 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (21%)
          Length = 950

 Score = 52.0 bits (26), Expect = 1e-06
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 134 tgttttcttttagtaggcatgctaaaatca 163
           |||||| |||||||||||||||||||||||
Sbjct: 226 tgttttattttagtaggcatgctaaaatca 197


>gnl|LJGI|TC67986 similar to UniRef100_A7P111 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (15%)
          Length = 779

 Score = 52.0 bits (26), Expect = 1e-06
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 134 tgttttcttttagtaggcatgctaaaatca 163
           |||||| |||||||||||||||||||||||
Sbjct: 528 tgttttattttagtaggcatgctaaaatca 499