Miyakogusa Predicted Gene
- Lj6g3v1954200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1954200.1 Non Chatacterized Hit- tr|I3SML4|I3SML4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,63.89,0.0003,
,NODE_96199_length_251_cov_61.697212.path2.1
(129 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82251 198 5e-51
gnl|LJGI|TC61677 similar to UniRef100_A7P685 Cluster: Chromosome... 137 2e-32
gnl|LJGI|FS343626 similar to UniRef100_A6MZZ6 Cluster: H/ACA rib... 94 2e-19
gnl|LJGI|TC58860 similar to UniRef100_A6MZZ6 Cluster: H/ACA ribo... 94 2e-19
gnl|LJGI|GO036905 UniRef100_A6ZEA0 Cluster: Eukaryotic translati... 72 8e-13
gnl|LJGI|TC77340 similar to UniRef100_A6MZZ6 Cluster: H/ACA ribo... 58 1e-08
gnl|LJGI|GO031824 similar to UniRef100_A5B6U7 Cluster: Enolase; ... 54 2e-07
gnl|LJGI|TC70164 54 2e-07
gnl|LJGI|FS326550 52 8e-07
gnl|LJGI|TC81770 50 3e-06
>gnl|LJGI|TC82251
Length = 534
Score = 198 bits (100), Expect = 5e-51
Identities = 112/116 (96%)
Strand = Plus / Plus
Query: 14 gaagggttattaggaagtgggagatgtcacctactactaaaccttctaaaccagatgttt 73
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 1 gaagggttattaggaagtgggagatgtcacctactactaaaccttctcaaccagatcttt 60
Query: 74 tgcaacttgtcttgattgatgctgaggtatgctgctgtgacttcagttcatgaaat 129
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61 tgcgacttgtcttgattgatgctgaggtatgctgttgtgacttcagttcatgaaat 116
>gnl|LJGI|TC61677 similar to UniRef100_A7P685 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 707
Score = 137 bits (69), Expect = 2e-32
Identities = 120/136 (88%), Gaps = 7/136 (5%)
Strand = Plus / Plus
Query: 1 atggaagatcagag-aagggttattaggaagtgggagatgtcacctactactaaaccttc 59
|||||||||||||| ||||||||||||||||||||||||| |||| || | |||||||
Sbjct: 358 atggaagatcagagcaagggttattaggaagtgggagatggcaccaacggttgaaccttc 417
Query: 60 taaaccagatgttttgcaacttgtcttgattgatgctgaggtatg------ctgctgtga 113
||||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 418 taaactagatgctttgctacttgtcttgattgatgctgaggtatgtaacaactgctgtga 477
Query: 114 cttcagttcatgaaat 129
||||||||||||||||
Sbjct: 478 cttcagttcatgaaat 493
>gnl|LJGI|FS343626 similar to UniRef100_A6MZZ6 Cluster: H/ACA ribonucleoprotein
complex subunit 2; n=2; Oryza sativa|Rep: H/ACA
ribonucleoprotein complex subunit 2 - Oryza sativa
subsp. indica (Rice), partial (29%)
Length = 687
Score = 93.7 bits (47), Expect = 2e-19
Identities = 90/104 (86%), Gaps = 9/104 (8%)
Strand = Plus / Plus
Query: 1 atggaagatcagag-aagggttattaggaagtgggagatgtcacctactactaaaccttc 59
||||||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 194 atggaagatcagaccaaggtttattaggaagtgggagatggcacctactgctaaaccttc 253
Query: 60 taaaccagatgttttgcaacttgtcttgattgatgctgaggtat 103
|||| ||||||||||||||||||||||||| ||||||
Sbjct: 254 taaa--------tttgcaacttgtcttgattgatgctaaggtat 289
>gnl|LJGI|TC58860 similar to UniRef100_A6MZZ6 Cluster: H/ACA ribonucleoprotein
complex subunit 2; n=2; Oryza sativa|Rep: H/ACA
ribonucleoprotein complex subunit 2 - Oryza sativa
subsp. indica (Rice), partial (29%)
Length = 1269
Score = 93.7 bits (47), Expect = 2e-19
Identities = 90/104 (86%), Gaps = 9/104 (8%)
Strand = Plus / Plus
Query: 1 atggaagatcagag-aagggttattaggaagtgggagatgtcacctactactaaaccttc 59
||||||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 776 atggaagatcagaccaaggtttattaggaagtgggagatggcacctactgctaaaccttc 835
Query: 60 taaaccagatgttttgcaacttgtcttgattgatgctgaggtat 103
|||| ||||||||||||||||||||||||| ||||||
Sbjct: 836 taaa--------tttgcaacttgtcttgattgatgctaaggtat 871
>gnl|LJGI|GO036905 UniRef100_A6ZEA0 Cluster: Eukaryotic translation initiation factor;
n=1; Artemisia annua|Rep: Eukaryotic translation
initiation factor - Artemisia annua (Sweet wormwood),
partial (6%)
Length = 698
Score = 71.9 bits (36), Expect = 8e-13
Identities = 82/97 (84%), Gaps = 9/97 (9%)
Strand = Plus / Plus
Query: 1 atggaagatcagag-aagggttattaggaagtgggagatgtcacctactactaaaccttc 59
||||||||||||| |||| |||||||||||||||||||| ||||||| |||||||||
Sbjct: 558 atggaagatcagaccaaggtttattaggaagtgggagatggcacctacggctaaacctta 617
Query: 60 taaaccagatgttttgcaacttgtcttgattgatgct 96
|||| |||||||||||||||||||||||||
Sbjct: 618 taaa--------tttgcaacttgtcttgattgatgct 646
>gnl|LJGI|TC77340 similar to UniRef100_A6MZZ6 Cluster: H/ACA ribonucleoprotein
complex subunit 2; n=2; Oryza sativa|Rep: H/ACA
ribonucleoprotein complex subunit 2 - Oryza sativa
subsp. indica (Rice), partial (21%)
Length = 478
Score = 58.0 bits (29), Expect = 1e-08
Identities = 56/64 (87%), Gaps = 7/64 (10%)
Strand = Plus / Plus
Query: 72 tttgcaacttgtcttgattgatgctgaggtatg------ctgctgtgacttcagttcatg 125
||||||||||||||||||||||||| | ||||| |||||||||||||||||||||
Sbjct: 97 tttgcaacttgtcttgattgatgct-aagtatgttgcaactgctgtgacttcagttcatg 155
Query: 126 aaat 129
||||
Sbjct: 156 aaat 159
>gnl|LJGI|GO031824 similar to UniRef100_A5B6U7 Cluster: Enolase; n=1; Vitis
vinifera|Rep: Enolase - Vitis vinifera (Grape), partial
(4%)
Length = 566
Score = 54.0 bits (27), Expect = 2e-07
Identities = 82/99 (82%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 atggaagatcagag-aagggttattaggaagtgggagatgtcacctactactaaaccttc 59
||||| |||||||| |||||| ||| |||| ||||||||| | || ||| || |||||||
Sbjct: 148 atggaggatcagagcaagggtgattcggaaatgggagatggctccaacttctgaaccttc 207
Query: 60 taaaccagatgttttgcaacttgtcttgattgatgctga 98
|||||| ||| | | ||||| |||||||||||| ||||
Sbjct: 208 caaaccatatgctctacaactcgtcttgattgattctga 246
>gnl|LJGI|TC70164
Length = 666
Score = 54.0 bits (27), Expect = 2e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 17 gggttattaggaagtgggagatgtcacctactactaaaccttc 59
||||||||||||||| ||||||||| |||||| || |||||||
Sbjct: 616 gggttattaggaagtaggagatgtcccctactgctgaaccttc 658
>gnl|LJGI|FS326550
Length = 721
Score = 52.0 bits (26), Expect = 8e-07
Identities = 38/41 (92%), Gaps = 2/41 (4%)
Strand = Plus / Plus
Query: 1 atggaagatcagagaa--gggttattaggaagtgggagatg 39
|||||||||||||| | |||||||||||||||||||||||
Sbjct: 630 atggaagatcagagcaaggggttattaggaagtgggagatg 670
>gnl|LJGI|TC81770
Length = 850
Score = 50.1 bits (25), Expect = 3e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 105 ctgctgtgacttcagttcatgaaat 129
|||||||||||||||||||||||||
Sbjct: 184 ctgctgtgacttcagttcatgaaat 208