Miyakogusa Predicted Gene

Lj6g3v1946590.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1946590.1 Non Chatacterized Hit- tr|C5X9K0|C5X9K0_SORBI
Putative uncharacterized protein Sb02g003050 OS=Sorghu,48.45,3e-18,MFS
general substrate transporter,Major facilitator superfamily domain,
general substrate transporte,CUFF.60274.1
         (996 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74675 weakly similar to UniRef100_A2Q2S7 Cluster: Gen...   617   e-176

>gnl|LJGI|TC74675 weakly similar to UniRef100_A2Q2S7 Cluster: General substrate
           transporter; n=1; Medicago truncatula|Rep: General
           substrate transporter - Medicago truncatula (Barrel
           medic), partial (20%)
          Length = 500

 Score =  617 bits (311), Expect = e-176
 Identities = 314/315 (99%)
 Strand = Plus / Plus

                                                                       
Query: 682 ccagtgccatggactgtgaactcagaaatctatccagaagaattccgaggtgtatgtggg 741
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ccagtgccatggactgtgaactcagaaatctatccagaagaattccgaggtgtatgtggg 60

                                                                       
Query: 742 ggcatgtcagccactgtaaactgggtttgcagtgtgataatgtcacagagttttctttca 801
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggcatgtcagccactgtaaactgggtttgcagtgtgataatgtcacagagttttctttca 120

                                                                       
Query: 802 atttctgatgctgttggccttggtgggagttttgcgattcttggtgttatagccgtggtt 861
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atttctgatgctgttggccttggtgggagttttgcgattcttggtgttatagccgtggtt 180

                                                                       
Query: 862 gcattcttatttgtgctcttgtttgtgccagagacaaaaggattgacatttgaagaaatg 921
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcattcttatttgtgctcttgtttgtgccagagacaaaaggattgacatttgaagaaatg 240

                                                                       
Query: 922 acactcatatggaagaggagagccaggggtaaagattatgacacacaaagccttcttgag 981
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 241 acactcatatggaagaggagagccaggggtaaagattatgacacactaagccttcttgag 300

                          
Query: 982 ggaaaccagtcctaa 996
           |||||||||||||||
Sbjct: 301 ggaaaccagtcctaa 315