Miyakogusa Predicted Gene
- Lj6g3v1946570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1946570.1 Non Chatacterized Hit- tr|K3YJT9|K3YJT9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si014508,48.11,2e-18,OS02G0684300 PROTEIN,NULL;
UNCHARACTERIZED,NULL; Ndc1_Nup,Nucleoporin protein
Ndc1-Nup,CUFF.60273.1
(1050 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68792 similar to UniRef100_A7QTZ4 Cluster: Chromosome... 1735 0.0
gnl|LJGI|TC57998 weakly similar to UniRef100_A7QTZ4 Cluster: Chr... 385 e-106
>gnl|LJGI|TC68792 similar to UniRef100_A7QTZ4 Cluster: Chromosome undetermined
scaffold_174, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_174, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(44%)
Length = 1079
Score = 1735 bits (875), Expect = 0.0
Identities = 875/875 (100%)
Strand = Plus / Plus
Query: 176 gggaagtgactcatcatttgcacagggttttacatactaagagatccatatttgctcctc 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggaagtgactcatcatttgcacagggttttacatactaagagatccatatttgctcctc 60
Query: 236 caaaaggatctgcagcagcagaaacaaatccaagtgagcatctcctttcagctttggagg 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaaaggatctgcagcagcagaaacaaatccaagtgagcatctcctttcagctttggagg 120
Query: 296 agagtaatccaacatctcttcttcggtatcttgcatatcttgatctctgcatggtttgcg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agagtaatccaacatctcttcttcggtatcttgcatatcttgatctctgcatggtttgcg 180
Query: 356 agaacaatgttgatacttggcggcgtgcagcattttttgaagaaactggtgagacataca 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaacaatgttgatacttggcggcgtgcagcattttttgaagaaactggtgagacataca 240
Query: 416 aaagagtaattgctgtgtgcttgaggcctctagagcaccttgcctccagattaggtgaag 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaagagtaattgctgtgtgcttgaggcctctagagcaccttgcctccagattaggtgaag 300
Query: 476 gattaggaaattctcctgacaaacctgcacaactatcgaatcaattattgtccccaacag 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gattaggaaattctcctgacaaacctgcacaactatcgaatcaattattgtccccaacag 360
Query: 536 atgcacggctagatttgaagaatggagaagaactgtacaacttccagctacatgcatgtt 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgcacggctagatttgaagaatggagaagaactgtacaacttccagctacatgcatgtt 420
Query: 596 gttcaaggattgttgcctcactgactgcctgctcacgtaaagaggataagtttggggttg 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttcaaggattgttgcctcactgactgcctgctcacgtaaagaggataagtttggggttg 480
Query: 656 ctcagctttctgggagtaatgctgcagtggtttcgacactgatatcctgcctacttgctg 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctcagctttctgggagtaatgctgcagtggtttcgacactgatatcctgcctacttgctg 540
Query: 716 tcgaaaatttcatgggaaagaaaacaaacctgcaatctccaaatcagttgttgggacctg 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcgaaaatttcatgggaaagaaaacaaacctgcaatctccaaatcagttgttgggacctg 600
Query: 776 ccggaatcaaatgggcaaccgcaaacagtggaagagtagatgttcctgctgtcaaaagaa 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccggaatcaaatgggcaaccgcaaacagtggaagagtagatgttcctgctgtcaaaagaa 660
Query: 836 gaactggcccagtaaatccaaaagcatacgctatcgctgatgttctcaggacttcaatct 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaactggcccagtaaatccaaaagcatacgctatcgctgatgttctcaggacttcaatct 720
Query: 896 accaaattgtctctgctttccatgatgagatgttggctggttctaaagcaagtcttctgg 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 accaaattgtctctgctttccatgatgagatgttggctggttctaaagcaagtcttctgg 780
Query: 956 agaaggattggatcactagtgggaaaccgctttttggtactcatgagatgcttatacaga 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 agaaggattggatcactagtgggaaaccgctttttggtactcatgagatgcttatacaga 840
Query: 1016 aattacgtcttttccttgattttagagctacctga 1050
|||||||||||||||||||||||||||||||||||
Sbjct: 841 aattacgtcttttccttgattttagagctacctga 875
>gnl|LJGI|TC57998 weakly similar to UniRef100_A7QTZ4 Cluster: Chromosome undetermined
scaffold_174, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_174,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (17%)
Length = 816
Score = 385 bits (194), Expect = e-106
Identities = 209/214 (97%)
Strand = Plus / Plus
Query: 1 atgggaattcctgcagccgctaagggatctttgaagctctccactgttgctttcttcttc 60
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 603 atgggaattcctgcagccgctaagcgagctttgaagctctccactgttgctttcttcttc 662
Query: 61 tcggctgttttgttggatattctgccgcattcgtttaagtgcagtgttgctactagagct 120
||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 663 tcggctgttttgttggagattctgccacatccgtttaagtgcagtgttgctactagagct 722
Query: 121 ttcttcgttgagcagattgtgttttcttttgcgagttttgctgtcttcctttgctgggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ttcttcgttgagcagattgtgttttcttttgcgagttttgctgtcttcctttgctgggaa 782
Query: 181 gtgactcatcatttgcacagggttttacatacta 214
||||||||||||||||||||||||||||||||||
Sbjct: 783 gtgactcatcatttgcacagggttttacatacta 816